RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 FAM122BQ7Z309 247 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 MUC20Q8N307 709 aaPredicted RBP12.11□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 ZDHHC1Q8WTX9 485 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 LIPHQ8WWY8 451 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 FBXW5Q969U6 566 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 RASD2Q96D21 266 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 MRPS24Q96EL2 167 aaKnown RBP12.11□□□□□ -0.47
TRIM40-207ENST00000396581 SLC25A32Q9H2D1 315 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 GPR160Q9UJ42 338 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 TCRBV16S1A1N1A0A5B0 115 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 PRSS38A1L453 326 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 GGT3PA6NGU5 568 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 RFPL4AA6NLU0 287 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 OR4C45A6NMZ5 311 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 POM121CA8CG34 1229 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 RFPL4AL1F8VTS6 287 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 SIX6O95475 246 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 PROS1P07225 676 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 SLC35E2P0CK97 266 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 CDKN2AP42771 156 aaKnown RBP12.1□□□□□ -0.47
TRIM40-207ENST00000396581 PLA2G7Q13093 441 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 FAM53BQ14153 422 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 LIPNQ5VXI9 398 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 PTCRAQ6ISU1 281 aaPredicted RBP12.1□□□□□ -0.47
TRIM40-207ENST00000396581 TSSK4Q6SA08 328 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 DGAT2L6Q6ZPD8 337 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 CFAP77Q6ZQR2 320 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 Q6ZS52 159 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 CDC20BQ86Y33 519 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 TMEFF1Q8IYR6 380 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 CA13Q8N1Q1 262 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF614Q8N883 585 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 LRRC75AQ8NAA5 344 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 OR10Z1Q8NGY1 313 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 Q96M85 177 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 CCNL2Q96S94 520 aaPredicted RBP12.1□□□□□ -0.47
TRIM40-207ENST00000396581 ZFYVE21Q9BQ24 234 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 FKRPQ9H9S5 495 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 ZC4H2Q9NQZ6 224 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 WSB2Q9NYS7 404 aaPredicted RBP12.1□□□□□ -0.47
TRIM40-207ENST00000396581 TRAV8-7A0A075B6U6 113 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 CHURC1-FNTBB4DL54 471 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 H3BUI4 141 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 PSMD9O00233 223 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 CTAG2O75638 210 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 OR8G3PP0DMU2 310 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 HNRNPA2B1P22626 353 aaKnown RBP12.1□□□□□ -0.47
TRIM40-207ENST00000396581 ERVK-25P63136 954 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 SYT13Q7L8C5 426 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 FAM220AQ7Z4H9 259 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 KRT77Q7Z794 578 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 TMPRSS12Q86WS5 348 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF227Q86WZ6 799 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF417Q8TAU3 575 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 MCHR2Q969V1 340 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 BMFQ96LC9 184 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 APMAPQ9HDC9 416 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 HIF3AQ9Y2N7 669 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 KLHDC2Q9Y2U9 406 aa12.1□□□□□ -0.47
TRIM40-207ENST00000396581 IGKV1D-42A0A075B6H8 117 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 FXYD6-FXYD2A0A087WZ82 144 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 TMEM72A0PK05 275 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 HSPB2A8KAH6 182 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 H0YGG7 62 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 GOSR2O14653 212 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 EIF4E2O60573 245 aaKnown RBP12.09□□□□□ -0.47
TRIM40-207ENST00000396581 TXNDC12O95881 172 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 ITGB2P05107 769 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 AKAIN1P0CW23 69 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 MAZP56270 477 aaKnown RBP12.09□□□□□ -0.47
TRIM40-207ENST00000396581 ARF3P61204 181 aaPredicted RBP12.09□□□□□ -0.47
TRIM40-207ENST00000396581 DMWDQ09019 674 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 TOMM20Q15388 145 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 HSPB2Q16082 182 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 LEG1Q6P5S2 330 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 MCATQ8IVS2 390 aaKnown RBP12.09□□□□□ -0.47
TRIM40-207ENST00000396581 SDR16C5Q8N3Y7 309 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 OR4N2Q8NGD1 307 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 OR5T3Q8NGG3 340 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 OR4D10Q8NGI6 311 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 VSTM2LQ96N03 204 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 MNTQ99583 582 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 SEMA4CQ9C0C4 833 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 FXYD6Q9H0Q3 95 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 MYOZ1Q9NP98 299 aaPredicted RBP12.09□□□□□ -0.47
TRIM40-207ENST00000396581 SLC17A5Q9NRA2 495 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 ACTR10Q9NZ32 417 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 SLC6A5Q9Y345 797 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 HRH3Q9Y5N1 445 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 TRAV14DV4A0A0A6YYC5 116 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.09□□□□□ -0.47
TRIM40-207ENST00000396581 A0A1B0GVT2 93 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 A6NCN8 305 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 TTLL8A6PVC2 850 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 H0Y8X5 98 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 DNASE2O00115 360 aaPredicted RBP12.09□□□□□ -0.47
TRIM40-207ENST00000396581 SCAMP1O15126 338 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 SEMA4FO95754 770 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms