RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PIGFQ07326 219 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 HNRNPA0Q13151 305 aaKnown RBP11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 TMEM255AQ5JRV8 349 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 CFAP157Q5JU67 520 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 FAM209AQ5JX71 171 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 ZYG11AQ6WRX3 759 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 FRRS1Q6ZNA5 592 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 ZNF620Q6ZNG0 422 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 PAQR4Q8N4S7 273 aaPredicted RBP11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 POU5F2Q8N7G0 328 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 CCNYL1Q8N7R7 359 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 OR7A2PQ8NGA2 310 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 CCL17Q92583 94 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 MOAP1Q96BY2 351 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 SLC30A2Q9BRI3 323 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 DCAF16Q9NXF7 216 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 SLCO1C1Q9NYB5 712 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 SLC17A7Q9P2U7 560 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 GPR160Q9UJ42 338 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 ARL2BPQ9Y2Y0 163 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 POMT1Q9Y6A1 747 aa11.48□□□□□ -0.57
VCPKMT-201ENST00000395859 TRAV40A0A0B4J280 105 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 SLC22A23A1A5C7 686 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 TRIM13O60858 407 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 CRCPO75575 148 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 C6orf47O95873 294 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 CD79AP11912 226 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 CLDN17P56750 224 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 DNAJB13P59910 316 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 ERVS71-1P61550 626 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 TSTQ16762 297 aaKnown RBP11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 R3HCC1LQ7Z5L2 792 aaKnown RBP11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 LRRC34Q8IZ02 419 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 KDM8Q8N371 416 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 CCDC63Q8NA47 563 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 ZSCAN4Q8NAM6 433 aaPredicted RBP11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 OR10S1Q8NGN2 331 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 OR5AK3PQ8NH89 298 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 SYNPRQ8TBG9 265 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 MIPOL1Q8TD10 442 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 SNX33Q8WV41 574 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 DYRK2Q92630 601 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 OR2M2Q96R28 347 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 C16orf95Q9H693 158 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 TNFRSF19Q9NS68 423 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 DECR2Q9NUI1 292 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 ADPRHL2Q9NX46 363 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 NPTNQ9Y639 398 aa11.47□□□□□ -0.57
VCPKMT-201ENST00000395859 PRAMEF27A3QJZ7 478 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 ISPDA4D126 451 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 DUXAA6NLW8 204 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 G3V2L1 256 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 SNNO75324 88 aaPredicted RBP11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 DCTN3O75935 186 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 IGHV1-46P01743 117 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 IGHV3-13P01766 116 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 SERPINA5P05154 406 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 ADH4P08319 380 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 MATN1P21941 496 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 PTDSS1P48651 473 aaKnown RBP11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 RAB1AP62820 205 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 SLC3A1Q07837 685 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 EPS8Q12929 822 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 STX3Q13277 289 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 RAB39AQ14964 217 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 TMEM155Q4W5P6 130 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 SPRNQ5BIV9 151 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 OXLD1Q5BKU9 147 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 LIPMQ5VYY2 423 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 BRD3OSQ6XYD6 125 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 RNF165Q6ZSG1 346 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 Q6ZSV7 163 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 FRMD7Q6ZUT3 714 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 HMGN2P46Q86SG4 172 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 DDIASQ8IXT1 998 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 GPR137CQ8N3F9 429 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 FGFBP3Q8TAT2 258 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 ZNF519Q8TB69 540 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 COQ8BQ96D53 544 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 DIRC2Q96SL1 478 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 POLE3Q9NRF9 147 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 FGFR1OP2Q9NVK5 253 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 EGFL7Q9UHF1 273 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 IL20RAQ9UHF4 553 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 EMCNQ9ULC0 261 aa11.46□□□□□ -0.57
VCPKMT-201ENST00000395859 HUWE1Q7Z6Z7 4374 aaKnown RBP11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 GPR137BO60478 399 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 UROSP10746 265 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 PNMTP11086 282 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 MMP15P51511 669 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 HBA1P69905 142 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 BNIP2Q12982 314 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 PCLAFQ15004 111 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 GSTA3Q16772 222 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 ZNF774Q6NX45 483 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 RNF130Q86XS8 419 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 ZDHHC16Q969W1 377 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 PTDSS2Q9BVG9 487 aa11.45□□□□□ -0.58
VCPKMT-201ENST00000395859 TUBB1Q9H4B7 451 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms