RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 ZNF229Q9UJW7 825 aa13.95□□□□□ -0.18
CXCL12-206ENST00000395795 hCG_2039718K7EN88 272 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 MRASO14807 208 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 SHOX2O60902 331 aaPredicted RBP13.94□□□□□ -0.18
CXCL12-206ENST00000395795 GIPRP48546 466 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 CSNK1A1P48729 337 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 PDLIM4P50479 330 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 ARFIP2P53365 341 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 PIGFQ07326 219 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 SNTB2Q13425 540 aaKnown RBP13.94□□□□□ -0.18
CXCL12-206ENST00000395795 GSG1Q2KHT4 349 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 INTS11Q5TA45 600 aaKnown RBP13.94□□□□□ -0.18
CXCL12-206ENST00000395795 TTC33Q6PID6 262 aaPredicted RBP13.94□□□□□ -0.18
CXCL12-206ENST00000395795 CXXC5Q7LFL8 322 aaKnown RBP13.94□□□□□ -0.18
CXCL12-206ENST00000395795 SNX32Q86XE0 403 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 IL17RDQ8NFM7 739 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 OR6N1Q8NGY5 312 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 TMEM255BQ8WV15 326 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 C10orf82Q8WW14 230 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 LIPHQ8WWY8 451 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 VRK1Q99986 396 aaPredicted RBP13.94□□□□□ -0.18
CXCL12-206ENST00000395795 MRPL37Q9BZE1 423 aaKnown RBP13.94□□□□□ -0.18
CXCL12-206ENST00000395795 CCDC134Q9H6E4 229 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 NANSQ9NR45 359 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 TMEM160Q9NX00 188 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 POFUT2Q9Y2G5 429 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 SH3GLB1Q9Y371 365 aa13.94□□□□□ -0.18
CXCL12-206ENST00000395795 LOC390937A0A1W2PQ73 354 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 ZNF726A6NNF4 738 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 NDUFS8O00217 210 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 STAMBPO95630 424 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 NPPAP01160 153 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 IGF2P01344 180 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 ZNF16P17020 682 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-206ENST00000395795 GIFP27352 417 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 OR1E2P47887 323 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 ZNF133P52736 654 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-206ENST00000395795 RPL18Q07020 188 aaKnown RBP13.93□□□□□ -0.18
CXCL12-206ENST00000395795 PIN1Q13526 163 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-206ENST00000395795 DAG1Q14118 895 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 KRT80Q6KB66 452 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 SPATA21Q7Z572 469 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 PAQR4Q8N4S7 273 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-206ENST00000395795 ARIH2OSQ8N7S6 290 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 SLC25A44Q96H78 314 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-206ENST00000395795 BPESC1Q9GZL8 116 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 B3GAT2Q9NPZ5 323 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 TMEM38BQ9NVV0 291 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 CMTM6Q9NX76 183 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 MYEF2Q9P2K5 600 aaKnown RBP13.93□□□□□ -0.18
CXCL12-206ENST00000395795 RIMS3Q9UJD0 308 aa13.93□□□□□ -0.18
CXCL12-206ENST00000395795 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.92□□□□□ -0.18
CXCL12-206ENST00000395795 LOC100653049A0A140TA62 436 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 BBIP1A8MTZ0 92 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 FAM220BPB1ANY3 271 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 DHHO43323 396 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 KRT34O76011 436 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 OR7A10O76100 309 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 OR5F1O95221 314 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 MT-ND1P03886 318 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 CD79AP11912 226 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 CAPZA2P47755 286 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 PTDSS1P48651 473 aaKnown RBP13.92□□□□□ -0.18
CXCL12-206ENST00000395795 RAB1AP62820 205 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 GUCY1A3Q02108 690 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 FHL1Q13642 323 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 RAB39AQ14964 217 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 ARMC4Q5T2S8 1044 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 CYB5R2Q6BCY4 276 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 PIWIL3Q7Z3Z3 882 aaKnown RBP13.92□□□□□ -0.18
CXCL12-206ENST00000395795 LRP11Q86VZ4 500 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 SLC22A24Q8N4F4 322 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 MOSPD2Q8NHP6 518 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 RASSF5Q8WWW0 418 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 MRPL24Q96A35 216 aaKnown RBP13.92□□□□□ -0.18
CXCL12-206ENST00000395795 MSI2Q96DH6 328 aaKnown RBP13.92□□□□□ -0.18
CXCL12-206ENST00000395795 SH3GL1Q99961 368 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 ECSITQ9BQ95 431 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 DENND2DQ9H6A0 471 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-206ENST00000395795 MYOZ1Q9NP98 299 aaPredicted RBP13.92□□□□□ -0.18
CXCL12-206ENST00000395795 A4GNTQ9UNA3 340 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 FKBP7Q9Y680 259 aa13.92□□□□□ -0.18
CXCL12-206ENST00000395795 IGKV1D-43A0A0B4J1Z2 117 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 RNF13O43567 381 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 PIP5K1CO60331 668 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 LILRA1O75019 489 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 F13BP05160 661 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 TROVE2P10155 538 aaKnown RBP eCLIP13.91□□□□□ -0.18
CXCL12-206ENST00000395795 FUT1P19526 365 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 IGFBP5P24593 272 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 IL2RGP31785 369 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 KDELR2P33947 212 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 GLRXP35754 106 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 AQP2P41181 271 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 RBM34P42696 430 aaKnown RBP13.91□□□□□ -0.18
CXCL12-206ENST00000395795 RIN1Q13671 783 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 GGTLC2Q14390 218 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 CYBRD1Q53TN4 286 aa13.91□□□□□ -0.18
CXCL12-206ENST00000395795 C8orf82Q6P1X6 216 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-206ENST00000395795 ERICH5Q6P6B1 374 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms