RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PLXNA3P51805 1871 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 CCDC157Q569K6 752 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 FAM74A1Q5RGS3 127 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 SLC29A4Q7RTT9 530 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 SHISA5Q8N114 240 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 TMEM74BQ9NUR3 256 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 OR5V1Q9UGF6 321 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 C2orf72A6NCS6 295 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 H3BML4 177 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 HLA-AP01891 365 aaKnown RBP14.73□□□□□ -0.05
PCDH1-203ENST00000394536 MELKQ14680 651 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 ALG11Q2TAA5 492 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 TMUB2Q71RG4 321 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 MAMDC2Q7Z304 686 aaPredicted RBP14.73□□□□□ -0.05
PCDH1-203ENST00000394536 FAM174AQ8TBP5 190 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 ZPLD1Q8TCW7 415 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 OR1F2PQ96R84 312 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 PDE7BQ9NP56 450 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 VDAC3Q9Y277 283 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 SCN8AQ9UQD0 1980 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 ATP6V1G2-DDX39BF2Z307 99 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 ZNF20P17024 532 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 CDKN2AP42771 156 aaKnown RBP14.73□□□□□ -0.05
PCDH1-203ENST00000394536 ZP2Q05996 745 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 RTL10Q7L3V2 364 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 MNTQ99583 582 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 WDR76Q9H967 626 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 KCNG2Q9UJ96 466 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 POMT2Q9UKY4 750 aa14.73□□□□□ -0.05
PCDH1-203ENST00000394536 TDRD6O60522 2096 aaKnown RBP14.73□□□□□ -0.05
PCDH1-203ENST00000394536 TMEM82A0PJX8 343 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 OR5K4A6NMS3 321 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 C4orf47A7E2U8 309 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 ACSM4P0C7M7 580 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 TMIGD3P0DMS9 266 aaPredicted RBP14.72□□□□□ -0.05
PCDH1-203ENST00000394536 S100A10P60903 97 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 SCRN3Q0VDG4 424 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 SLC36A2Q495M3 483 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 LINC00346Q8IVM7 164 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 ZNF440Q8IYI8 595 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 OR4C16Q8NGL9 310 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 OR51Q1Q8NH59 317 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 ASB12Q8WXK4 309 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 MS4A3Q96HJ5 214 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 DHCR7Q9UBM7 475 aaKnown RBP14.72□□□□□ -0.05
PCDH1-203ENST00000394536 PLCL2Q9UPR0 1127 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 MED12Q93074 2177 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 ZNF432O94892 652 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 SLC2A5P22732 501 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 RORAP35398 523 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 NUDT1P36639 197 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 PRICKLE4Q2TBC4 344 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 C17orf107Q6ZR85 190 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 STEAP2Q8NFT2 490 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 OR10K1Q8NGX5 313 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 BAHD1Q8TBE0 780 aaPredicted RBP14.72□□□□□ -0.05
PCDH1-203ENST00000394536 C10orf90Q96M02 699 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 RABL2AQ9UBK7 228 aaPredicted RBP14.72□□□□□ -0.05
PCDH1-203ENST00000394536 MSRAQ9UJ68 235 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 A0A087WV62 115 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 EFCAB7A8K855 629 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 ITGA3P26006 1051 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 RASGEF1BQ0VAM2 473 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 CARD17Q5XLA6 110 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 FAM180AQ6UWF9 173 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 PEG10Q86TG7 708 aaKnown RBP14.72□□□□□ -0.05
PCDH1-203ENST00000394536 BCORP1Q8N888 145 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 OR10AC1Q8NH08 325 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 OR14A16Q8NHC5 309 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 ST8SIA4Q92187 359 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 FAM60AQ9NP50 221 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 ASF1BQ9NVP2 202 aa14.72□□□□□ -0.05
PCDH1-203ENST00000394536 C7orf66A4D0T2 115 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 HCKP08631 526 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 RBM34P42696 430 aaKnown RBP14.71□□□□□ -0.05
PCDH1-203ENST00000394536 RPL18Q07020 188 aaKnown RBP14.71□□□□□ -0.05
PCDH1-203ENST00000394536 DMRTC1Q5HYR2 192 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 CBLN3Q6UW01 205 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 SLC16A9Q7RTY1 509 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 MARCH3Q86UD3 253 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 CPNE2Q96FN4 548 aaPredicted RBP14.71□□□□□ -0.05
PCDH1-203ENST00000394536 LMF2Q9BU23 707 aaKnown RBP14.71□□□□□ -0.05
PCDH1-203ENST00000394536 ZFP64Q9NPA5 681 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 DNAJB12Q9NXW2 375 aaKnown RBP14.71□□□□□ -0.05
PCDH1-203ENST00000394536 H7C2Y5 167 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 HLA-DQB1P01920 261 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 PPP3CBP16298 524 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 HSD11B1P28845 292 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 CLLU1Q5K131 121 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 RHOUQ7L0Q8 258 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 ZBTB8AQ96BR9 441 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 STEAP1Q9UHE8 339 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 EMC9Q9Y3B6 208 aa14.71□□□□□ -0.05
PCDH1-203ENST00000394536 A0A1B0GUH1 482 aa14.71□□□□□ -0.06
PCDH1-203ENST00000394536 ZNF705EA8MWA4 302 aaPredicted RBP14.71□□□□□ -0.06
PCDH1-203ENST00000394536 SRPX2O60687 465 aaPredicted RBP14.71□□□□□ -0.06
PCDH1-203ENST00000394536 CBX7O95931 251 aa14.71□□□□□ -0.06
PCDH1-203ENST00000394536 SLC6A9P48067 706 aa14.71□□□□□ -0.06
PCDH1-203ENST00000394536 MAP2K6P52564 334 aa14.71□□□□□ -0.06
PCDH1-203ENST00000394536 IL13RA1P78552 427 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms