RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 MAELQ96JY0 434 aaKnown RBP13.11□□□□□ -0.31
CHMP3-202ENST00000393773 ASPNQ9BXN1 380 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 SLC52A3Q9NQ40 469 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 MRPL39Q9NYK5 338 aaKnown RBP13.11□□□□□ -0.31
CHMP3-202ENST00000393773 TESQ9UGI8 421 aaKnown RBP13.11□□□□□ -0.31
CHMP3-202ENST00000393773 A0A0B4J2E0 115 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 A0A1B0GX12 115 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 LRRN3E7EW58 273 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 HDAC3O15379 428 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 TMPRSS2O15393 492 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 ZNF500O60304 480 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-202ENST00000393773 CDC14BO60729 498 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 SERPINA5P05154 406 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 ETS2P15036 469 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 ZNF250P15622 560 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 CSNK1A1P48729 337 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 KLF3P57682 345 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-202ENST00000393773 ERVS71-1P61550 626 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 MVKQ03426 396 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 FADDQ13158 208 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 MMEL1Q495T6 779 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 C6orf10Q5SRN2 563 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 ULK3Q6PHR2 472 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 DHRS4L2Q6PKH6 230 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 PXKQ7Z7A4 578 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 SNX32Q86XE0 403 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 SKA3Q8IX90 412 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 GTF3AQ92664 365 aaKnown RBP13.1□□□□□ -0.31
CHMP3-202ENST00000393773 GTF2H4Q92759 462 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 RAB39BQ96DA2 213 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 PAIP1Q9H074 479 aaKnown RBP13.1□□□□□ -0.31
CHMP3-202ENST00000393773 RMND5AQ9H871 391 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 HINT3Q9NQE9 182 aaKnown RBP13.1□□□□□ -0.31
CHMP3-202ENST00000393773 SDR39U1Q9NRG7 319 aaPredicted RBP13.1□□□□□ -0.31
CHMP3-202ENST00000393773 NKIRAS2Q9NYR9 191 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 ZIM2Q9NZV7 527 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 TAAR3PQ9P1P4 343 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 PCDHGB1Q9Y5G3 927 aa13.1□□□□□ -0.31
CHMP3-202ENST00000393773 TRPC5OSA6NMA1 111 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 J3QLI3 93 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 PLPP3O14495 311 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 TPST1O60507 370 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 SNNO75324 88 aaPredicted RBP13.09□□□□□ -0.31
CHMP3-202ENST00000393773 FAM157BP0CG42 384 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 ARAFP10398 606 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 ANPEPP15144 967 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 LSP1P33241 339 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 CRYBB2P43320 205 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 UBA52P62987 128 aaKnown RBP13.09□□□□□ -0.31
CHMP3-202ENST00000393773 PMS2P3Q13401 168 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 TUSC1Q2TAM9 212 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 PCGF3Q3KNV8 242 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 WDR88Q6ZMY6 472 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 PIWIL3Q7Z3Z3 882 aaKnown RBP13.09□□□□□ -0.31
CHMP3-202ENST00000393773 C10orf111Q8N326 155 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 SLC22A24Q8N4F4 322 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 SLC30A7Q8NEW0 376 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 TMEM54Q969K7 222 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 SLC47A1Q96FL8 570 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 EPYCQ99645 322 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 ZNF696Q9H7X3 374 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 TCF7L2Q9NQB0 619 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 OPN4Q9UHM6 478 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 WIPI2Q9Y4P8 454 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 CACNG2Q9Y698 323 aa13.09□□□□□ -0.31
CHMP3-202ENST00000393773 IGHV1-69-2A0A0G2JMI3 117 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 RGS16O15492 202 aaPredicted RBP13.08□□□□□ -0.32
CHMP3-202ENST00000393773 TPST2O60704 377 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 SERPINI2O75830 405 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 BIDP55957 195 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 TNFAIP8L3Q5GJ75 292 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 DCAF12L2Q5VW00 463 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 TMEM154Q6P9G4 183 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 SLC2A7Q6PXP3 512 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 MAVSQ7Z434 540 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 MSRB3Q8IXL7 192 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 BPIFB2Q8N4F0 458 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 NFKBIDQ8NI38 313 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 RNF217Q8TC41 542 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 SNX33Q8WV41 574 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 WFDC6Q9BQY6 131 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 TMEM43Q9BTV4 400 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 ZNF747Q9BV97 191 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 OR51B6Q9H340 312 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 RAD21L1Q9H4I0 556 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 TMEM38BQ9NVV0 291 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 SLC25A37Q9NYZ2 338 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 GLTPQ9NZD2 209 aa13.08□□□□□ -0.32
CHMP3-202ENST00000393773 ZNF726A6NNF4 738 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 C5orf58C9J3I9 102 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 CLDN25C9JDP6 229 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 CLIC1O00299 241 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 PRSS23O95084 383 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 SNAP29O95721 258 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 CCL2P13500 99 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 POLR2JP52435 117 aaKnown RBP13.07□□□□□ -0.32
CHMP3-202ENST00000393773 RGS8P57771 180 aaPredicted RBP13.07□□□□□ -0.32
CHMP3-202ENST00000393773 NCALDP61601 193 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 RBBP4Q09028 425 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 ZP4Q12836 540 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms