RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CSNK1DP48730 415 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 RPS13P62277 151 aaKnown RBP3.14□□□□□ -1.91
XRN1-202ENST00000392981 ALX1Q15699 326 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 ARHGAP11BQ3KRB8 267 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 C14orf28Q4W4Y0 310 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 RESP18Q5W5W9 173 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 PARM1Q6UWI2 310 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 LDLRAD3Q86YD5 345 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 CBR4Q8N4T8 237 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 NOXO1Q8NFA2 376 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 THAP6Q8TBB0 222 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 TMA16Q96EY4 203 aaKnown RBP3.14□□□□□ -1.91
XRN1-202ENST00000392981 CCM2Q9BSQ5 444 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 FGF20Q9NP95 211 aaPredicted RBP3.14□□□□□ -1.91
XRN1-202ENST00000392981 TREM2Q9NZC2 230 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 RALYQ9UKM9 306 aaKnown RBP3.14□□□□□ -1.91
XRN1-202ENST00000392981 KLHDC2Q9Y2U9 406 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 RIMS1Q86UR5 1692 aaKnown RBP3.14□□□□□ -1.91
XRN1-202ENST00000392981 ZMYM6O95789 1325 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 SMIM28A0A1B0GU29 152 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 OR5B21A6NL26 309 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 TRDCB7Z8K6 153 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 SLC16A4O15374 487 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 ALDOBP05062 364 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 HOXB4P17483 251 aaPredicted RBP3.14□□□□□ -1.91
XRN1-202ENST00000392981 ERFP50548 548 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 ZCWPW2Q504Y3 356 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 SDHAF4Q5VUM1 108 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 H3F3CQ6NXT2 135 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 GDPD4Q6W3E5 623 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 C3P1Q6ZMU1 363 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 NPAS3Q8IXF0 933 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 ADTRPQ96IZ2 230 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 RNF167Q9H6Y7 350 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 KIR3DX1Q9H7L2 352 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 MSRB1Q9NZV6 116 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 NME7Q9Y5B8 376 aa3.14□□□□□ -1.91
XRN1-202ENST00000392981 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.13□□□□□ -1.91
XRN1-202ENST00000392981 WDR17Q8IZU2 1322 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 CDHR2Q9BYE9 1310 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 LAMA5O15230 3695 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 ZNF646O15015 1829 aaPredicted RBP3.13□□□□□ -1.91
XRN1-202ENST00000392981 K7EN84 100 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 ETV2O00321 342 aaPredicted RBP3.13□□□□□ -1.91
XRN1-202ENST00000392981 BTN3A3O00478 584 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 FKBP6O75344 327 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 GATBO75879 557 aaKnown RBP3.13□□□□□ -1.91
XRN1-202ENST00000392981 RAB36O95755 333 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 IFNA5P01569 189 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 IL6P05231 212 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 GPIP06744 558 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 SLC2A2P11168 524 aaPredicted RBP3.13□□□□□ -1.91
XRN1-202ENST00000392981 TBXA2RP21731 343 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 PSME3P61289 254 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 TPBGQ13641 420 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 MFSD14CQ5VZR4 134 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 ZNF782Q6ZMW2 699 aaPredicted RBP3.13□□□□□ -1.91
XRN1-202ENST00000392981 ITIH5Q86UX2 942 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 CATSPER3Q86XQ3 398 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 ZNF677Q86XU0 584 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 OR10A7Q8NGE5 316 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 APH1BQ8WW43 257 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 OR8D1Q8WZ84 308 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 AP3S1Q92572 193 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 MYDGFQ969H8 173 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 RTP4Q96DX8 246 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 ZNF486Q96H40 463 aaPredicted RBP3.13□□□□□ -1.91
XRN1-202ENST00000392981 POM121L2Q96KW2 1035 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 Q96MT0 163 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 PARD6GQ9BYG4 376 aaPredicted RBP3.13□□□□□ -1.91
XRN1-202ENST00000392981 MLXIPLQ9NP71 852 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.13□□□□□ -1.91
XRN1-202ENST00000392981 PLLPQ9Y342 182 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 WIPI2Q9Y4P8 454 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 ABCA3Q99758 1704 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 KIAA1217Q5T5P2 1943 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 A0A087WZ39 114 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 MEIOCA2RUB1 952 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 HIDE1A8MVS5 230 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 H3BNH8 94 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 KLRC4-KLRK1H3BQV0 150 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 PHF1O43189 567 aaPredicted RBP3.13□□□□□ -1.91
XRN1-202ENST00000392981 ZNF749O43361 778 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 HYAL3O43820 417 aaPredicted RBP3.13□□□□□ -1.91
XRN1-202ENST00000392981 TRMUO75648 421 aaKnown RBP3.13□□□□□ -1.91
XRN1-202ENST00000392981 CLDN14O95500 239 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 TYMSP04818 313 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 COX5BP10606 129 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 AP1S1P61966 158 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 MGAT3Q09327 533 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 OXA1LQ15070 435 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 HBMQ6B0K9 141 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 CD300LGQ6UXG3 332 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 C4orf22Q6V702 233 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 OR2T6Q8NHC8 308 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 PCNPQ8WW12 178 aaKnown RBP3.13□□□□□ -1.91
XRN1-202ENST00000392981 FAF2Q96CS3 445 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 SGK494Q96LW2 274 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 OR52A5Q9H2C5 316 aa3.13□□□□□ -1.91
XRN1-202ENST00000392981 OR51B6Q9H340 312 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms