RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 TP53TG3Q9ULZ0 132 aa2.09□□□□□ -2.07
TRAJ40-201ENST00000390497 GOLT1BQ9Y3E0 138 aa2.09□□□□□ -2.07
TRAJ40-201ENST00000390497 PDS5BQ9NTI5 1447 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 NCF1BA6NI72 391 aaPredicted RBP2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 GJE1A6NN92 205 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 USP27XA6NNY8 438 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 NCF1CA8MVU1 366 aaPredicted RBP2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 ERVV-1B6SEH8 477 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 SPECC1L-ADORA2AF8WAN1 911 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 L7N2F9 121 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 PEX7O00628 323 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 EEDO75530 441 aaKnown RBP2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 CLIC3O95833 236 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 ACTL6AO96019 429 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 ERCC1P07992 297 aaPredicted RBP2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 PNMA6AP0CW24 399 aaPredicted RBP2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 CRISP2P16562 243 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 UQCRFS1P47985 274 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 SH3BGRP55822 239 aaPredicted RBP2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 KRTAP10-9P60411 292 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 ZNF92Q03936 586 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 KRTAP1-1Q07627 177 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 TWF1Q12792 350 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 TCP10Q12799 353 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 MAB21L1Q13394 359 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 AQP6Q13520 282 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 GPNMBQ14956 572 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 SF3A2Q15428 464 aaKnown RBP2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 HSDL1Q3SXM5 330 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 BEX5Q5H9J7 111 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 VAX1Q5SQQ9 334 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 CCNJQ5T5M9 372 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 STUMQ69YW2 141 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 FRMPD2BQ6IN97 320 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 TMEM53Q6P2H8 277 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 CNIH2Q6PI25 160 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 TMEM179Q6ZVK1 233 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 NIPA1Q7RTP0 329 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 IQCKQ8N0W5 287 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 PUSL1Q8N0Z8 303 aaKnown RBP2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 ZADH2Q8N4Q0 377 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 DCAF4L2Q8NA75 395 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 CCDC54Q8NEL0 328 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 OR4F15Q8NGB8 312 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 OR1S2Q8NGQ3 325 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 LKAAEAR1Q8TD35 194 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 SDR42E1Q8WUS8 393 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 STARD8Q92502 1023 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 DCUN1D4Q92564 292 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 ARPC1AQ92747 370 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 KIFAP3Q92845 792 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 MED8Q96G25 268 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 NRTNQ99748 197 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 RASL11BQ9BPW5 248 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 DEFB127Q9H1M4 99 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 LINC00597Q9H2U6 94 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 OR51M1Q9H341 326 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 SRMSQ9H3Y6 488 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 DDX18Q9NVP1 670 aaKnown RBP2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 IL17CQ9P0M4 197 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 LGALS13Q9UHV8 139 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 VANGL2Q9ULK5 521 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 MAPK8IP3Q9UPT6 1336 aa2.08□□□□□ -2.08
TRAJ40-201ENST00000390497 TRBV9A0A0B4J1U6 114 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 RBMY1BA6NDE4 496 aaKnown RBP2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 RBMY1EA6NEQ0 496 aaKnown RBP2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 KLLNB2CW77 178 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 TRIM49D1C9J1S8 452 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 H0YC42 278 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 PPP1R2P9O14990 202 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 GIPP09681 153 aaPredicted RBP2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 CSF3P09919 207 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 RBMY1DP0C7P1 496 aaKnown RBP2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 GKN3PP0CG01 181 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 STAG3L3P0CL85 134 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 RBMY1A1P0DJD3 496 aaKnown RBP2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 CALM1P0DP23 149 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 CALM2P0DP24 149 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 CALM3P0DP25 149 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 RALBP11234 206 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 CD1EP15812 388 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 FUT3P21217 361 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 GSTM3P21266 225 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 SERPINB5P36952 375 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 MAGEA1P43355 309 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 CCR8P51685 355 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 LIPEQ05469 1076 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 SPAG1Q07617 926 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 LRRC10Q5BKY1 277 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 PAGE3Q5JUK9 113 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 TWF2Q6IBS0 349 aaKnown RBP2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 ANKRD26P1Q6NSI1 321 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 ZNF544Q6NX49 715 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 CLEC2AQ6UVW9 174 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 C6orf89Q6UWU4 347 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 RFLNAQ6ZTI6 216 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 ABHD13Q7L211 337 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 TMCO2Q7Z6W1 182 aaPredicted RBP2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 CMC1Q7Z7K0 106 aa2.07□□□□□ -2.08
TRAJ40-201ENST00000390497 TGIF2LYQ8IUE0 185 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms