RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 PRAMEF8Q5VWM4 474 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 PRAMEF7Q5VXH5 474 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 KCNRGQ8N5I3 272 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 SCMH1Q96GD3 660 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 OR1F2PQ96R84 312 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 ZFP57Q9NU63 452 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 GFOD1Q9NXC2 390 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 IL20Q9NYY1 176 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 CA5BQ9Y2D0 317 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 NEUROG3Q9Y4Z2 214 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 SYT7O43581 403 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 SULT1A3P0DMM9 295 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 SULT1A4P0DMN0 295 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 HOXB2P14652 356 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 MGMTP16455 207 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 BAMBIQ13145 260 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 ZXDCQ2QGD7 858 aaPredicted RBP13.1□□□□□ -0.31
RTF1-201ENST00000389629 METRNLQ641Q3 311 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 SDF2Q99470 211 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 SLC33A1O00400 549 aaPredicted RBP13.09□□□□□ -0.31
RTF1-201ENST00000389629 CRTAPO75718 401 aaPredicted RBP13.09□□□□□ -0.31
RTF1-201ENST00000389629 TXNDC12O95881 172 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 RNH1P13489 461 aaKnown RBP13.09□□□□□ -0.31
RTF1-201ENST00000389629 HTR2CP28335 458 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 CSF2RBP32927 897 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 BVESQ8NE79 360 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 WDR92Q96MX6 357 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 MYADMQ96S97 322 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 ETV7Q9Y603 341 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 GPR75O95800 540 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 ACOT7LQ6ZUV0 252 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 SUMF2Q8NBJ7 301 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 TSSK2Q96PF2 358 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 GPA33Q99795 319 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
RTF1-201ENST00000389629 CLDND1Q9NY35 253 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 PCDHB10Q9UN67 800 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 ZNF337Q9Y3M9 751 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 TSTD3H0UI37 97 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 DVL2O14641 736 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 PHYHO14832 338 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 HSPA12AO43301 675 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 SUSD5O60279 629 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 OR2F2O95006 317 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 OR4E1P0C645 316 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 POU3F2P20265 443 aaPredicted RBP13.09□□□□□ -0.31
RTF1-201ENST00000389629 FXYD4P59646 89 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 HERV-K104P61576 105 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 OR2F1Q13607 317 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 FAM189A2Q15884 450 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 PPP1R1CQ8WVI7 109 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 SLC41A2Q96JW4 573 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 CMSS1Q9BQ75 279 aaKnown RBP13.09□□□□□ -0.31
RTF1-201ENST00000389629 SELENOIQ9C0D9 397 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 FBXO4Q9UKT5 387 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 PPIL1Q9Y3C6 166 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 ANK1P16157 1881 aa13.09□□□□□ -0.31
RTF1-201ENST00000389629 SLC22A23A1A5C7 686 aa13.08□□□□□ -0.31
RTF1-201ENST00000389629 PRAMEF25A6NGN4 478 aa13.08□□□□□ -0.31
RTF1-201ENST00000389629 TAS2R31P59538 309 aa13.08□□□□□ -0.31
RTF1-201ENST00000389629 SMAD2Q15796 467 aaKnown RBP13.08□□□□□ -0.31
RTF1-201ENST00000389629 CBLN2Q8IUK8 224 aa13.08□□□□□ -0.31
RTF1-201ENST00000389629 SLC22A11Q9NSA0 550 aa13.08□□□□□ -0.31
RTF1-201ENST00000389629 FBXL4Q9UKA2 621 aa13.08□□□□□ -0.31
RTF1-201ENST00000389629 CSAG2Q9Y5P2 127 aa13.08□□□□□ -0.31
RTF1-201ENST00000389629 URGCP-MRPS24S4R325 110 aa13.08□□□□□ -0.31
RTF1-201ENST00000389629 A0A0B4J293 547 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 FABP1P07148 127 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 ALDH3B1P43353 468 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 PXNP49023 591 aaPredicted RBP13.08□□□□□ -0.32
RTF1-201ENST00000389629 C1orf61Q13536 156 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 EIF2S3LQ2VIR3 472 aaKnown RBP13.08□□□□□ -0.32
RTF1-201ENST00000389629 PAPD4Q6PIY7 484 aaKnown RBP13.08□□□□□ -0.32
RTF1-201ENST00000389629 MAMSTRQ6ZN01 415 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 KDM8Q8N371 416 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 FRMD1Q8N878 549 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 IL17RCQ8NAC3 791 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 FNDC9Q8TBE3 224 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 NXPE3Q969Y0 559 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 SIRT3Q9NTG7 399 aaPredicted RBP13.08□□□□□ -0.32
RTF1-201ENST00000389629 PRODH2Q9UF12 536 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 HHLA2Q9UM44 414 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 ZNF726A6NNF4 738 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 HIDE1A8MVS5 230 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 CTNSO60931 367 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 S100PP25815 95 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 RAB13P51153 203 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 GABRG1Q8N1C3 465 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.08□□□□□ -0.32
RTF1-201ENST00000389629 RHBDD3Q9Y3P4 386 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 EFCAB7A8K855 629 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 IGF2P01344 180 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 TNFP01375 233 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 CARD17Q5XLA6 110 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 PRR22Q8IZ63 422 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 MUC20Q8N307 709 aaPredicted RBP13.08□□□□□ -0.32
RTF1-201ENST00000389629 OR5T1Q8NG75 326 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 FAM71F1Q96KD3 344 aaPredicted RBP13.08□□□□□ -0.32
RTF1-201ENST00000389629 APOOQ9BUR5 198 aa13.08□□□□□ -0.32
RTF1-201ENST00000389629 CNTNAP3Q9BZ76 1288 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms