RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 GBA3Q9H227 469 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 RBKSQ9H477 322 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 DUSP21Q9H596 190 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 DHX33Q9H6R0 707 aaKnown RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 ZNF442Q9H7R0 627 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 EDA2RQ9HAV5 297 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 GRPEL1Q9HAV7 217 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 UGT1A7Q9HAW7 530 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 UGT1A10Q9HAW8 530 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 UGT1A8Q9HAW9 530 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 RETNQ9HD89 108 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 ZCCHC17Q9NP64 241 aaKnown RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 PALMDQ9NP74 551 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 NUDT15Q9NV35 164 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 ASF1BQ9NVP2 202 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 ANO10Q9NW15 660 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 THUMPD1Q9NXG2 353 aaKnown RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 AIPL1Q9NZN9 384 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 EPS15L1Q9UBC2 864 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 TBK1Q9UHD2 729 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 IL20RAQ9UHF4 553 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 HOOK1Q9UJC3 728 aaKnown RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 MMP17Q9ULZ9 603 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 COPS3Q9UNS2 423 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 RPL36Q9Y3U8 105 aaKnown RBP-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 R4GN34 69 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 SDK1Q7Z5N4 2213 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 DOCK6Q96HP0 2047 aa-0.01□□□□□ -2.41
SNORD28-201ENST00000384706 MSH6P52701 1360 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 CR1P17927 2039 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 ABCC4O15439 1325 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 IGKV1D-13A0A0B4J2D9 117 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 A0A1W2PRV1 198 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 G3V4G9 280 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 HAS3O00219 553 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 ZNF73O43830 326 aaPredicted RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 PFKFB2O60825 505 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 LRATO95237 230 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 CYB5R3P00387 301 aaPredicted RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 OPN1LWP04000 364 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 IGLV7-43P04211 117 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 CA3P07451 260 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 HSP90AB1P08238 724 aaKnown RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 HMOX1P09601 288 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 OR8U9P0C7N5 309 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 INAFM2P0DMQ5 153 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 IGKV1-13P0DP09 117 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 LYNX1P0DP58 116 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 ATF6P18850 670 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 SLC2A5P22732 501 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 ME2P23368 584 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 PSMB5P28074 263 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 AKT2P31751 481 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 KIF5BP33176 963 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 RORAP35398 523 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 DDOSTP39656 456 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 OPRD1P41143 372 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 EPS15P42566 896 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 GALR1P47211 349 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 CCR8P51685 355 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 TAS2R31P59538 309 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 GABPB1Q06547 395 aaPredicted RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 TCP10Q12799 353 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 BIKQ13323 160 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 PPIL2Q13356 520 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 MXD4Q14582 209 aaPredicted RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 OXA1LQ15070 435 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 ZSCAN26Q16670 478 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 SMU1Q2TAY7 513 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 TP53I3Q53FA7 332 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 FAM222AQ5U5X8 452 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 OR52E8Q6IFG1 317 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 WDR59Q6PJI9 974 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 ARL9Q6T311 187 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 PLET1Q6UQ28 207 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 WDR88Q6ZMY6 472 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 PGAP1Q75T13 922 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 UTS2BQ765I0 119 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 SLC16A13Q7RTY0 426 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 GALNTL5Q7Z4T8 443 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 RABEPKQ7Z6M1 372 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 TAF8Q7Z7C8 310 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 KIAA1328Q86T90 577 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 PLA2G4DQ86XP0 818 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 CCDC65Q8IXS2 484 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 ZNF567Q8N184 647 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 DEFB119Q8N690 84 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 SLC35G3Q8N808 338 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 ACOT4Q8N9L9 421 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 CATSPER1Q8NEC5 780 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 DENND6BQ8NEG7 585 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 NOXO1Q8NFA2 376 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 TTLQ8NG68 377 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 OR5AU1Q8NGC0 362 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 OR4D9Q8NGE8 314 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 OR4S2Q8NH73 311 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 RNASE11Q8TAA1 199 aaKnown RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 PSMA8Q8TAA3 256 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 EXOC6Q8TAG9 804 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 MUC7Q8TAX7 377 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms