RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 WASHC5Q12768 1159 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 THOC5Q13769 683 aaKnown RBP-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 PDIA5Q14554 519 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 KCNJ11Q14654 390 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 VEPH1Q14D04 833 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 TAF11Q15544 211 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 SGCAQ16586 387 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 SLC36A2Q495M3 483 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 ZBED5Q49AG3 693 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 FAM91A1Q658Y4 838 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 TEX43Q6ZNM6 134 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 LRRC74BQ6ZQY2 392 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 FAM43BQ6ZT52 329 aaPredicted RBP-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 CCDC190Q86UF4 302 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 LHFPL3Q86UP9 236 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 ARMC8Q8IUR7 673 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 BBS7Q8IWZ6 715 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 FAM58AQ8N1B3 248 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 STPG2Q8N412 459 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 C3orf22Q8N5N4 141 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 ICA1LQ8NDH6 482 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 CCDC54Q8NEL0 328 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 OR5T1Q8NG75 326 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 OR8B12Q8NGG6 310 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 OR14L1PQ8NHC6 308 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 MOSPD2Q8NHP6 518 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 PNPT1Q8TCS8 783 aaKnown RBP-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 YIPF5Q969M3 257 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 MRPL38Q96DV4 380 aaKnown RBP-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 C16orf58Q96GQ5 468 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 MASTLQ96GX5 879 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 GPR82Q96P67 336 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 YPEL2Q96QA6 119 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 VPS35Q96QK1 796 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 ERGIC2Q96RQ1 377 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 GAD1Q99259 594 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 RIT2Q99578 217 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 TRAIPQ9BWF2 469 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 SFXN3Q9BWM7 321 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 CNFNQ9BYD5 112 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 SRXN1Q9BYN0 137 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 LRRC2Q9BYS8 371 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 ROPN1BQ9BZX4 212 aaPredicted RBP-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 DDX24Q9GZR7 859 aaKnown RBP eCLIP-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 TLNRD1Q9H1K6 362 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 DEFB127Q9H1M4 99 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 SMARCAD1Q9H4L7 1026 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 PPCSQ9HAB8 311 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 ANKHQ9HCJ1 492 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 HELLSQ9NRZ9 838 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 HAO2Q9NYQ3 351 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 KIF25Q9UIL4 384 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 EIF3LQ9Y262 564 aaKnown RBP-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 TRPV2Q9Y5S1 764 aa-3.08□□□□□ -2.9
RNU6-1340P-201ENST00000384438 CECR2Q9BXF3 1484 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 SMG6Q86US8 1419 aaKnown RBP-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 INSRP06213 1382 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 WDFY4Q6ZS81 3184 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 KNDC1Q76NI1 1749 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 IGHV3-72A0A0B4J1Y9 119 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 SMIM28A0A1B0GU29 152 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 HELTA6NFD8 242 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 H3BNG1 76 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 TP53I11O14683 189 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 PCDHGA12O60330 932 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 JRKO75564 520 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 NKX2-2O95096 273 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 IGHV1-46P01743 117 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 IGF1P05019 195 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 SMIM18P0DKX4 95 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 CNR1P21554 472 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 GCKP35557 465 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 PAFAH1B1P43034 410 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 GYG1P46976 350 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 P2RX1P51575 399 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 CNN1P51911 297 aaKnown RBP-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 TPD52P55327 224 aaPredicted RBP-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 ROMO1P60602 79 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 TGFBR3Q03167 851 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 GBE1Q04446 702 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 SERINC3Q13530 473 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 PAFAH1B3Q15102 231 aaKnown RBP-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 TTLL9Q3SXZ7 439 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 USH1GQ495M9 461 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 C1orf100Q5SVJ3 147 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 CENPPQ6IPU0 288 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 NOXRED1Q6NXP6 359 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 USP45Q70EL2 814 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 MOB2Q70IA6 237 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 GET4Q7L5D6 327 aaPredicted RBP-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 CCDC60Q8IWA6 550 aaPredicted RBP-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 PLD5Q8N7P1 536 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 OR6C4Q8NGE1 309 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 OR51S1Q8NGJ8 323 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 EVI5LQ96CN4 794 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 AURKBQ96GD4 344 aaPredicted RBP-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 RAB3IPQ96QF0 476 aaPredicted RBP-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 NFKBIZQ9BYH8 718 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 SIRPDQ9H106 197 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 ABCG8Q9H221 673 aa-3.09□□□□□ -2.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms