RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 C1QTNF9BB2RNN3 333 aa23.93■■□□□ 1.42
MSX1-201ENST00000382723 GLCEO94923 617 aa23.93■■□□□ 1.42
MSX1-201ENST00000382723 C1QTNF9P0C862 333 aa23.93■■□□□ 1.42
MSX1-201ENST00000382723 LHFPL3Q86UP9 236 aa23.93■■□□□ 1.42
MSX1-201ENST00000382723 MEIOBQ8N635 442 aa23.93■■□□□ 1.42
MSX1-201ENST00000382723 TBX5Q99593 518 aa23.93■■□□□ 1.42
MSX1-201ENST00000382723 CHCHD3Q9NX63 227 aaKnown RBP23.93■■□□□ 1.42
MSX1-201ENST00000382723 HAO2Q9NYQ3 351 aa23.93■■□□□ 1.42
MSX1-201ENST00000382723 URB1O60287 2271 aaKnown RBP23.93■■□□□ 1.42
MSX1-201ENST00000382723 LOC102725191A0A1B0GVB3 256 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 TRMUO75648 421 aaKnown RBP23.92■■□□□ 1.42
MSX1-201ENST00000382723 MED22Q15528 200 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 UBE2UQ5VVX9 321 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 FAM205BPQ63HN1 556 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 OR5M11Q96RB7 305 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 SNX18Q96RF0 628 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 TUBA1CQ9BQE3 449 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 NPIPA2E9PIF3 369 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 NPIPA3F8WFD2 350 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 H3BSA7 217 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 SLC16A7O60669 478 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 VAMP5O95183 116 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 SBK2P0C263 348 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 NAA10P41227 235 aaPredicted RBP23.92■■□□□ 1.42
MSX1-201ENST00000382723 UCNP55089 124 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 CXADRP78310 365 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 CAMK2DQ13557 499 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 C3AR1Q16581 482 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 LINC01590Q5TEZ4 76 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 Q6ZS92 163 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 RBMXL3Q8N7X1 1067 aaKnown RBP23.92■■□□□ 1.42
MSX1-201ENST00000382723 OR10H4Q8NGA5 316 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 OR13F1Q8NGS4 319 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 FCGR1BQ92637 280 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 CRELD1Q96HD1 420 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 KCNK17Q96T54 332 aa23.92■■□□□ 1.42
MSX1-201ENST00000382723 EXOSC1Q9Y3B2 195 aaKnown RBP23.92■■□□□ 1.42
MSX1-201ENST00000382723 SLC35F4A4IF30 521 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 CCDC160A6NGH7 325 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 C12orf71A8MTZ7 269 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 J3QRE1 110 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 MYL12BO14950 172 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 ACTL6AO96019 429 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 CLDN17P56750 224 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 POU4F2Q12837 409 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 CARD17Q5XLA6 110 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 VASNQ6EMK4 673 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 ASB18Q6ZVZ8 466 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 ZNF511Q8NB15 262 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 OR9K2Q8NGE7 335 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 CPNE4Q96A23 557 aaPredicted RBP23.91■■□□□ 1.42
MSX1-201ENST00000382723 CNN2Q99439 309 aaKnown RBP23.91■■□□□ 1.42
MSX1-201ENST00000382723 MND1Q9BWT6 205 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 SPRR3Q9UBC9 169 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 MOKQ9UQ07 419 aa23.91■■□□□ 1.42
MSX1-201ENST00000382723 SMIM31A0A1B0GVY4 71 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 SELENOFO60613 162 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 SEC14L2O76054 403 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 GPANK1O95872 356 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 IGHA1P01876 353 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 HSMCR30P0CW71 290 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 CENPAP49450 140 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 SLC17A1Q14916 467 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 SYT6Q5T7P8 510 aaPredicted RBP23.9■■□□□ 1.42
MSX1-201ENST00000382723 RNLSQ5VYX0 342 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 NANOGP1Q8N7R0 232 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 FOXN4Q96NZ1 517 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 B9D1Q9UPM9 204 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 MGAQ8IWI9 3026 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 LIMS3P0CW19 117 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 LIMS4P0CW20 117 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 CTLA4P16410 223 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 HCCSP53701 268 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 FMODQ06828 376 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 GGTLC2Q14390 218 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 CREB3L2Q70SY1 520 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 TIMP4Q99727 224 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 TP53TG5Q9Y2B4 290 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 FKBP7Q9Y680 259 aa23.9■■□□□ 1.42
MSX1-201ENST00000382723 ZNF726A6NNF4 738 aa23.89■■□□□ 1.42
MSX1-201ENST00000382723 ETFDHQ16134 617 aa23.89■■□□□ 1.42
MSX1-201ENST00000382723 BCL2A1Q16548 175 aa23.89■■□□□ 1.42
MSX1-201ENST00000382723 ACBD7Q8N6N7 88 aa23.89■■□□□ 1.42
MSX1-201ENST00000382723 ZNF775Q96BV0 537 aaPredicted RBP23.89■■□□□ 1.42
MSX1-201ENST00000382723 ZNF385AQ96PM9 386 aaKnown RBP23.89■■□□□ 1.42
MSX1-201ENST00000382723 TAAR6Q96RI8 345 aa23.89■■□□□ 1.42
MSX1-201ENST00000382723 FAM192AQ9GZU8 254 aa23.89■■□□□ 1.42
MSX1-201ENST00000382723 ERVK13-1Q9NX77 482 aa23.89■■□□□ 1.42
MSX1-201ENST00000382723 NDUFA13Q9P0J0 144 aa23.89■■□□□ 1.42
MSX1-201ENST00000382723 TVP23AA6NH52 213 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 TAF4O00268 1085 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 WISP2O76076 250 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 CLRN1P58418 232 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 RPS3AP61247 264 aaKnown RBP23.88■■□□□ 1.41
MSX1-201ENST00000382723 DOC2BQ14184 412 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 POU4F3Q15319 338 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 TIGD6Q17RP2 521 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 OR2G6Q5TZ20 316 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 GPR107Q5VW38 600 aa23.88■■□□□ 1.41
MSX1-201ENST00000382723 PLXDC2Q6UX71 529 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms