RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 CCKBRP32239 447 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 DIO1P49895 249 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 PPT1P50897 306 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 NTHL1P78549 312 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 DUSP8Q13202 625 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 RAB33AQ14088 237 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 TSC22D1Q15714 1073 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 LURAP1LQ8IV03 231 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 TCEAL8Q8IYN2 117 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 OR2L13Q8N349 312 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 BPIFB2Q8N4F0 458 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 OR4E2Q8NGC2 313 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 OR6N2Q8NGY6 317 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 DCUN1D4Q92564 292 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 C14orf79Q96F83 325 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 MRI1Q9BV20 369 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 VEGFDO43915 354 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 LDB3O75112 727 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 SPI1P17947 270 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 ITGB8P26012 769 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 AVPR2P30518 371 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 DHRS2Q13268 280 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 SMAD2Q15796 467 aaKnown RBP11.11□□□□□ -0.63
HERC6-203ENST00000380265 NKAPLQ5M9Q1 402 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 C3orf33Q6P1S2 294 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 NAA40Q86UY6 237 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 TET1Q8NFU7 2136 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 OR2A1Q8NGT9 310 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 BARX1Q9HBU1 254 aaPredicted RBP11.11□□□□□ -0.63
HERC6-203ENST00000380265 MKKSQ9NPJ1 570 aaPredicted RBP11.11□□□□□ -0.63
HERC6-203ENST00000380265 DHCR7Q9UBM7 475 aaKnown RBP11.11□□□□□ -0.63
HERC6-203ENST00000380265 APOBEC3BQ9UH17 382 aaKnown RBP11.11□□□□□ -0.63
HERC6-203ENST00000380265 OR1A2Q9Y585 309 aa11.11□□□□□ -0.63
HERC6-203ENST00000380265 IGKV1-8A0A0C4DH67 115 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 CDC40O60508 579 aaKnown RBP eCLIP11.1□□□□□ -0.63
HERC6-203ENST00000380265 HLA-DQA2P01906 255 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 PRNPP04156 253 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 C8AP07357 584 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 APEHP13798 732 aaKnown RBP11.1□□□□□ -0.63
HERC6-203ENST00000380265 ZNF14P17017 642 aaPredicted RBP11.1□□□□□ -0.63
HERC6-203ENST00000380265 AKR1C4P17516 323 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 CASRP41180 1078 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 RBM34P42696 430 aaKnown RBP11.1□□□□□ -0.63
HERC6-203ENST00000380265 ACTBP60709 375 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 ACTG1P63261 375 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 DEFB115Q30KQ5 88 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 ARHGAP11BQ3KRB8 267 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.1□□□□□ -0.63
HERC6-203ENST00000380265 ARMC10Q8N2F6 343 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 OR6S1Q8NH40 331 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 ZNF764Q96H86 408 aaPredicted RBP11.1□□□□□ -0.63
HERC6-203ENST00000380265 LMLNQ96KR4 655 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 INSM2Q96T92 566 aaPredicted RBP11.1□□□□□ -0.63
HERC6-203ENST00000380265 ALG12Q9BV10 488 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 GSN-AS1Q9NRJ2 163 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 STEAP1Q9UHE8 339 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 SPTBN2O15020 2390 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 TRBV23OR9-2A0A075B6M9 112 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.1□□□□□ -0.63
HERC6-203ENST00000380265 H7C1C5 153 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 ZNF208O43345 1280 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 CTAG2O75638 210 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 ZNF888P0CJ79 500 aaPredicted RBP11.1□□□□□ -0.63
HERC6-203ENST00000380265 PGAM2P15259 253 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 TLX1P31314 330 aaPredicted RBP11.1□□□□□ -0.63
HERC6-203ENST00000380265 RAB28P51157 221 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 CCR4P51679 360 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 LCN6P62502 163 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 LY6G6FQ5SQ64 297 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 UNQ9370/PRO34162Q6UXP9 181 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 ZNF558Q96NG5 402 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 UTP23Q9BRU9 249 aaKnown RBP11.1□□□□□ -0.63
HERC6-203ENST00000380265 MIOXQ9UGB7 285 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 LAMP5Q9UJQ1 280 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 TNFSF18Q9UNG2 199 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 OR2T1O43869 369 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 CXCL14O95715 111 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 TAS2R19P59542 299 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 ALKBH1Q13686 389 aaKnown RBP11.1□□□□□ -0.63
HERC6-203ENST00000380265 CDNFQ49AH0 187 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 KRBOX4Q5JUW0 171 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 ZNF600Q6ZNG1 722 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 GALNT16Q8N428 558 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 PLPP7Q8NBV4 271 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 OR51A4Q8NGJ6 313 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 FGF13Q92913 245 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 ARRDC3Q96B67 414 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 KXD1Q9BQD3 176 aa11.1□□□□□ -0.63
HERC6-203ENST00000380265 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.1□□□□□ -0.63
HERC6-203ENST00000380265 C4orf47A7E2U8 309 aa11.09□□□□□ -0.63
HERC6-203ENST00000380265 ZNF736B4DX44 427 aaPredicted RBP11.09□□□□□ -0.63
HERC6-203ENST00000380265 TPT1P13693 172 aaKnown RBP11.09□□□□□ -0.63
HERC6-203ENST00000380265 IL13RA1P78552 427 aa11.09□□□□□ -0.63
HERC6-203ENST00000380265 IRF4Q15306 451 aa11.09□□□□□ -0.63
HERC6-203ENST00000380265 RAB11BQ15907 218 aa11.09□□□□□ -0.63
HERC6-203ENST00000380265 TCTN1Q2MV58 587 aa11.09□□□□□ -0.63
HERC6-203ENST00000380265 ZNF658BQ4V348 819 aaPredicted RBP11.09□□□□□ -0.63
HERC6-203ENST00000380265 FAM109BQ6ICB4 259 aaPredicted RBP11.09□□□□□ -0.63
HERC6-203ENST00000380265 PGAP1Q75T13 922 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms