RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 CEACAM19Q7Z692 300 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 MS4A15Q8N5U1 240 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 OR1J4Q8NGS1 313 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 SGCZQ96LD1 299 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 KLHL15Q96M94 604 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 JSRP1Q96MG2 331 aaPredicted RBP17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 FOXN4Q96NZ1 517 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 OR5B2Q96R09 309 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 INTS14Q96SY0 518 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 SLC30A2Q9BRI3 323 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 TSPAN10Q9H1Z9 355 aaPredicted RBP17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 FREM2Q5SZK8 3169 aa17.82■□□□□ 0.44
PDLIM5-205ENST00000380180 hCG_2014768A0A024R1R8 64 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 TRBV2A0A0J9YWF9 115 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 A0A1W2PNR3 127 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 C21orf140B9A014 251 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 NPIPA5E9PKD4 350 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 TERTO14746 1132 aaKnown RBP17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 NCR1O76036 304 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 HLA-DQA2P01906 255 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 LIFP15018 202 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 CTLA4P16410 223 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 EDNRAP25101 427 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 DPP4P27487 766 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 CALRP27797 417 aaKnown RBP17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 SHC1P29353 583 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 RPS27P42677 84 aaKnown RBP17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 CENPAP49450 140 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 GDI2P50395 445 aaKnown RBP17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 HSF1Q00613 529 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 SELENBP1Q13228 472 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 ATP1A4Q13733 1029 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 FAM27D1Q5T7N8 215 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 Q6ZNX1 250 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 SLC35D2Q76EJ3 337 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 PXKQ7Z7A4 578 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 LAX1Q8IWV1 398 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 OR13C5Q8NGS8 318 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 ASB10Q8WXI3 467 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 LAMP5Q9UJQ1 280 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 NPIPA1Q9UND3 350 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 CMAHPQ9Y471 501 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 MRPS18BQ9Y676 258 aaKnown RBP17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 A0A087WZY1 265 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 IGLV1-36A0A0B4J1U3 117 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 ANKRD33BA6NCL7 494 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 ALOX5APP20292 161 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 SFTPDP35247 375 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 DAP3P51398 398 aaKnown RBP17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 TMEM176BQ3YBM2 270 aaPredicted RBP17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 ACSM3Q53FZ2 586 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 ACER2Q5QJU3 275 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 WDFY1Q8IWB7 410 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 TXNDC15Q96J42 360 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 FANCFQ9NPI8 374 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 MED29Q9NX70 200 aa17.81■□□□□ 0.44
PDLIM5-205ENST00000380180 MED13Q9UHV7 2174 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 LOC101059948A0A1B0GTJ6 334 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 A6NIZ1 184 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 NPIPB13A6NJU9 1138 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 NPIPB4C9JG80 1138 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 MAGEB3O15480 346 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 FZD7O75084 574 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 PSKH1P11801 424 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 MTNR1BP49286 362 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 DSCR4P56555 118 aaPredicted RBP17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 RAP1BP61224 184 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 RAP1AP62834 184 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 OTPQ5XKR4 325 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 TIGD3Q6B0B8 471 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 DCDC5Q6ZRR9 648 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 KCTD20Q7Z5Y7 419 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 GTPBP8Q8N3Z3 284 aaPredicted RBP17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 CHPT1Q8WUD6 406 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 SLC25A43Q8WUT9 341 aaPredicted RBP17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 AP3S1Q92572 193 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 RNF166Q96A37 237 aaPredicted RBP17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 MNTQ99583 582 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 PDCD1LG2Q9BQ51 273 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 ABCB9Q9NP78 766 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 MRM2Q9UI43 246 aaKnown RBP17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 KIAA1549Q9HCM3 1950 aa17.8■□□□□ 0.44
PDLIM5-205ENST00000380180 SLC35F4A4IF30 521 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 UPK1BO75841 260 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 SNX4O95219 450 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 CD1AP06126 327 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 TACSTD2P09758 323 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 OR8G3PP0DMU2 310 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 FKBP2P26885 142 aaKnown RBP17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 OR2B6P58173 313 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 GLRX5Q86SX6 157 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 CENPSQ8N2Z9 138 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 THEM6Q8WUY1 208 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 PSMF1Q92530 271 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 WDFY2Q96P53 400 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 RNF32Q9H0A6 362 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 ABCB10Q9NRK6 738 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 RYDENQ9NUL5 291 aaKnown RBP17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 B3GAT1Q9P2W7 334 aa17.79■□□□□ 0.44
PDLIM5-205ENST00000380180 ING1Q9UK53 422 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms