RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 SLC35D1Q9NTN3 355 aa9.84□□□□□ -0.83
NEDD9-201ENST00000379433 BTBD17A6NE02 478 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 HCN1O60741 890 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 CRYBB2P43320 205 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 FBXW4P57775 412 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 RAB40BQ12829 278 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 SERTAD2Q14140 314 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 INPP5JQ15735 1006 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-201ENST00000379433 PARP16Q8N5Y8 322 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 ZNRF4Q8WWF5 429 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 DNASE2BQ8WZ79 361 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 SGTBQ96EQ0 304 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 LCORQ96JN0 433 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-201ENST00000379433 C4orf36Q96KX1 117 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 TEAD3Q99594 435 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 BARHL1Q9BZE3 327 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 ASB6Q9NWX5 421 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 ANKRD10Q9NXR5 420 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 TEX13CA0A0J9YWL9 993 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 E9PQ18 207 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 SLC30A4O14863 429 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 AK1P00568 194 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 CCL4P13236 92 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 CD40LGP29965 261 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 GRK6P43250 576 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 DYRK1AQ13627 763 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 NKAIN1Q4KMZ8 207 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 SSX6Q7RTT6 188 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF550Q7Z398 422 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 ACBD7Q8N6N7 88 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 SLC24A4Q8NFF2 622 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 CHPT1Q8WUD6 406 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 YIPF5Q969M3 257 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF501Q96CX3 271 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-201ENST00000379433 NPAS1Q99742 590 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 SEMA4CQ9C0C4 833 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 GSN-AS1Q9NRJ2 163 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 COPS3Q9UNS2 423 aa9.83□□□□□ -0.84
NEDD9-201ENST00000379433 SIRT4Q9Y6E7 314 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-201ENST00000379433 METTL15A6NJ78 407 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 H0YIG0 161 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 TCAPO15273 167 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF264O43296 627 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 KLF4O43474 513 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 SSX4O60224 188 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 SELENOFO60613 162 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 CYTIPO60759 359 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 MED6O75586 246 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 EPHA8P29322 1005 aaPredicted RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 E2F1Q01094 437 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 FUT7Q11130 342 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 LEG1Q6P5S2 330 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 RNASE11Q8TAA1 199 aaKnown RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 DAZLQ92904 295 aaKnown RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 C3orf49Q96BT1 292 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 DIRAS2Q96HU8 199 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 MRPL37Q9BZE1 423 aaKnown RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 DUSP15Q9H1R2 295 aaPredicted RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 EPHA6Q9UF33 1036 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 GNG8Q9UK08 70 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF223Q9UK11 482 aaPredicted RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 STUB1Q9UNE7 303 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 KLK4Q9Y5K2 254 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 BHLHE40O14503 412 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 AKR7A2O43488 359 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF354AO60765 605 aaPredicted RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 CPNE3O75131 537 aaKnown RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 SLC25A12O75746 678 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 CXCR1P25024 350 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 ABCD3P28288 659 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 CTXN1P60606 82 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 FGFBP1Q14512 234 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 CD300LDQ6UXZ3 194 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 CFAP77Q6ZQR2 320 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 NEIL3Q8TAT5 605 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 SNX33Q8WV41 574 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 SMPDL3BQ92485 455 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 NKX3-1Q99801 234 aaPredicted RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 LMF2Q9BU23 707 aaKnown RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 AKIP1Q9NQ31 210 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 SLC22A11Q9NSA0 550 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 LSM2Q9Y333 95 aaKnown RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 UGT2A1Q9Y4X1 527 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 FREM3P0C091 2139 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 A0A087WV48 116 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 A0A1W2PQL4 384 aaPredicted RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 DDAH2O95865 285 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 KLK3P07288 261 aaPredicted RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 CELA2AP08217 269 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 RPS4Y1P22090 263 aaKnown RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 MAP3K8P41279 467 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 FLI1Q01543 452 aaPredicted RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF117Q03924 483 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 PRAMEF20Q5VT98 475 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 NIPAL3Q6P499 406 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 FAM131AQ6UXB0 335 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 MEPCEQ7L2J0 689 aaKnown RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 MFSD4AQ8N468 514 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 JSRP1Q96MG2 331 aaPredicted RBP9.82□□□□□ -0.84
NEDD9-201ENST00000379433 MFFQ9GZY8 342 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms