RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 GALNT9Q9HCQ5 603 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 SURF4O15260 269 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 EIF1BO60739 113 aaKnown RBP12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 PRKACAP17612 351 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 SPI1P17947 270 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 CARD18P57730 90 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 PSG6Q00889 435 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 MALLQ13021 153 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 LIPNQ5VXI9 398 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 LRRC18Q8N456 261 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 NECAB3Q96P71 396 aaPredicted RBP12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 OR14A2Q96R54 314 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 SAV1Q9H4B6 383 aaPredicted RBP12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 LHX9Q9NQ69 397 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 ZNF346Q9UL40 294 aaKnown RBP12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 COA3Q9Y2R0 106 aaPredicted RBP12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 NBASA2RRP1 2371 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 L7N2F9 121 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 M0R296 226 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 FOXS1O43638 330 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 S100A9P06702 114 aaKnown RBP12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 SLC2A5P22732 501 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 CLDN12P56749 244 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 STARD6P59095 220 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 P2RY14Q15391 338 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 LRRC37A5PQ49AS3 106 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 CBLN3Q6UW01 205 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 FTMTQ8N4E7 242 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 DTWD2Q8NBA8 298 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 OR4D11Q8NGI4 311 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 ST8SIA1Q92185 356 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 ENKD1Q9H0I2 346 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 FKRPQ9H9S5 495 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 KLHL9Q9P2J3 617 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 KLHL13Q9P2N7 655 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 CES1P1Q9UKY3 287 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 A0A087WUJ7 227 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 C5orf51A6NDU8 294 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 SDHAP31040 664 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 RPS19P39019 145 aaKnown RBP12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 RPL35P42766 123 aaKnown RBP12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 CCL11P51671 97 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 SPEM2Q0P670 501 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 ZMAT1Q5H9K5 638 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 AWAT2Q6E213 333 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 TTC9Q92623 222 aa12.93□□□□□ -0.34
SHROOM1-203ENST00000378679 A0A0B4J2E0 115 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 A0A1B0GX12 115 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 FFAR1O14842 300 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 MPIG6BO95866 241 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 CLUP10909 449 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 SLC35D3Q5M8T2 416 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 BAIAP2L2Q6UXY1 529 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 TPRA1Q86W33 373 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 D2HGDHQ8N465 521 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 OR2T35Q8NGX2 323 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 POTEKPQ9BYX7 375 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 ZNF701Q9NV72 531 aaPredicted RBP12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 NUP50Q9UKX7 468 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 WIF1Q9Y5W5 379 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 A0A1W2PPC1 479 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 GGT3PA6NGU5 568 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 GATBO75879 557 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 CD3GP09693 182 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 ZNF806P0C7X5 589 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 DIO1P49895 249 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 MVDP53602 400 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 OTPQ5XKR4 325 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 FAM205BPQ63HN1 556 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 XAF1Q6GPH4 301 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 NDUFAF7Q7L592 441 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 FAM46BQ96A09 425 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 MED29Q9NX70 200 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 DOCK4Q8N1I0 1966 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 TRDV1A0A1B0GX56 115 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 C4orf47A7E2U8 309 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 GPX5O75715 221 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 PDGFBP01127 241 aaPredicted RBP12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 CCL4P13236 92 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 PRSS3P35030 304 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 FXYD6P3P58550 94 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 TRA2AQ13595 282 aaKnown RBP eCLIP12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 CTF1Q16619 201 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 ABCA11PQ4W5N1 156 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 ZAR1Q86SH2 424 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 OR4Q3Q8NH05 313 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 CASTOR1Q8WTX7 329 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 C3orf49Q96BT1 292 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 CST11Q9H112 138 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 DNAJB12Q9NXW2 375 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 LRFN1Q9P244 771 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 EMC9Q9Y3B6 208 aa12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 NOP16Q9Y3C1 178 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-203ENST00000378679 FAM166BA8MTA8 275 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 LYRM1O43325 122 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 HYAL3O43820 417 aaPredicted RBP12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 SNRPBP14678 240 aaKnown RBP12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 TBXA2RP21731 343 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 GALEQ14376 348 aa12.91□□□□□ -0.34
SHROOM1-203ENST00000378679 TMPRSS11FQ6ZWK6 438 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms