RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 SLC35A5Q9BS91 424 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 CXXC1Q9P0U4 656 aaPredicted RBP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 TP53I11O14683 189 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 ITGA5P08648 1049 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 OR8U9P0C7N5 309 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 TIMP2P16035 220 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 TYRP1P17643 537 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 IL2RGP31785 369 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 INPP5JQ15735 1006 aaPredicted RBP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 TMEM183BQ1AE95 376 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 PRR18Q8N4B5 295 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 PIGXQ8TBF5 258 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 MALSU1Q96EH3 234 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 SAT2Q96F10 170 aaPredicted RBP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 SNX22Q96L94 193 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 SMOC1Q9H4F8 434 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 SFXN1Q9H9B4 322 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 MBLAC1A4D2B0 266 aaPredicted RBP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 PAX5Q02548 391 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 TRA2AQ13595 282 aaKnown RBP eCLIP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 CCL14Q16627 93 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 EXOSC6Q5RKV6 272 aaKnown RBP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 NOXRED1Q6NXP6 359 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 FAM220AQ7Z4H9 259 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 NXPE1Q8N323 547 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 LYSMD1Q96S90 227 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 CD84Q9UIB8 345 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 CBLCQ9ULV8 474 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 TMED3Q9Y3Q3 217 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 ASB1Q9Y576 335 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 MYO9BQ13459 2157 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 LAMB2P55268 1798 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 NHSQ6T4R5 1651 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 TSPAN11A1L157 253 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 OR6C76A6NM76 312 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 TBX19O60806 448 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 CCKARP32238 428 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 NOGQ13253 232 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 EBPQ15125 230 aaKnown RBP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 PCBP2Q15366 365 aaKnown RBP eCLIP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 ACSM3Q53FZ2 586 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 MESTQ5EB52 335 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 ELFN2Q5R3F8 820 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 FAM83HQ6ZRV2 1179 aaPredicted RBP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 PAQR9Q6ZVX9 377 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 PHYKPLQ8IUZ5 450 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 ZNF619Q8N2I2 560 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 ARL14EPQ8N8R7 260 aaPredicted RBP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 PNLDC1Q8NA58 520 aaKnown RBP10.86□□□□□ -0.67
NPHP4-202ENST00000378161 METTL21AQ8WXB1 218 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 MOAP1Q96BY2 351 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 LMF1Q96S06 567 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 PAAF1Q9BRP4 392 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 TAPBPLQ9BX59 468 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 SAMD10Q9BYL1 202 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 SYNPO2LQ9H987 977 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 LANCL2Q9NS86 450 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 GPR52Q9Y2T5 361 aa10.86□□□□□ -0.67
NPHP4-202ENST00000378161 TGM5O43548 720 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 MT-CO2P00403 227 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 SELPP16109 830 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 PYCR1P32322 319 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 ADRA1AP35348 466 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 NFATC2Q13469 925 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 PMS2P11Q13670 270 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 TGIF1Q15583 401 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 PRAMEF8Q5VWM4 474 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 PRAMEF7Q5VXH5 474 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 TPRG1Q6ZUI0 275 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 ZNF627Q7L945 461 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 MRGPRDQ8TDS7 321 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 FAM3CQ92520 227 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 RSPRY1Q96DX4 576 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 AUNIPQ9H7T9 357 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 RLIMQ9NVW2 624 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 WBP1LQ9NX94 342 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 BET1LQ9NYM9 111 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 IL20RAQ9UHF4 553 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 BACE2Q9Y5Z0 518 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 NHSL1Q5SYE7 1610 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 BTAF1O14981 1849 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 ZNF10P21506 573 aaPredicted RBP10.85□□□□□ -0.67
NPHP4-202ENST00000378161 EDNRAP25101 427 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 ARL3P36405 182 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 MVDP53602 400 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 NHLH1Q02575 133 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 ZNF763Q0D2J5 394 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 ARSIQ5FYB1 569 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 DNM1P34Q6PK57 102 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 NPAS4Q8IUM7 802 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 DCAF4L2Q8NA75 395 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 CXorf40AQ8TE69 158 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 TOMM40LQ969M1 308 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 SERINC2Q96SA4 455 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 CSNK1G1Q9HCP0 422 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 EXOSC3Q9NQT5 275 aaKnown RBP10.85□□□□□ -0.67
NPHP4-202ENST00000378161 LRFN1Q9P244 771 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 ASPDHA6ND91 283 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 CNMDO75829 334 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms