RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PRSS36Q5K4E3 855 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 RTL6Q6ICC9 239 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 BTLAQ7Z6A9 289 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 ZNF695Q8IW36 515 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 CCDC74AQ96AQ1 378 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 ZNF775Q96BV0 537 aaPredicted RBP13.82□□□□□ -0.2
NPHP4-201ENST00000378156 KCNIP1Q9NZI2 227 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 ANKRD33BA6NCL7 494 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 G3V3Y1 287 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 PPM1DO15297 605 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 NSA2O95478 260 aaKnown RBP13.82□□□□□ -0.2
NPHP4-201ENST00000378156 SNRNP70P08621 437 aaKnown RBP13.82□□□□□ -0.2
NPHP4-201ENST00000378156 NFYAP23511 347 aaPredicted RBP13.82□□□□□ -0.2
NPHP4-201ENST00000378156 FAPQ12884 760 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 RAB31Q13636 194 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 GDPD3Q7L5L3 318 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 OR51D1Q8NGF3 324 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 FRZBQ92765 325 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 MICU1Q9BPX6 476 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 AKIP1Q9NQ31 210 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 KLHL13Q9P2N7 655 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 TSPAN11A1L157 253 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 ZNF593O00488 134 aaPredicted RBP13.82□□□□□ -0.2
NPHP4-201ENST00000378156 RAB6AP20340 208 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 PCBD1P61457 104 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 SSX2Q16385 188 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 LYPD4Q6UWN0 246 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 PFN4Q8NHR9 129 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 GIMAP1Q8WWP7 306 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 HCAR1Q9BXC0 346 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 SLC17A4Q9Y2C5 497 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 PPIL1Q9Y3C6 166 aa13.82□□□□□ -0.2
NPHP4-201ENST00000378156 IRF2P14316 349 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 SIRPAP78324 504 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 DHRS4L2Q6PKH6 230 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 DPY19L2P2Q6ZN68 376 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 SLC35D2Q76EJ3 337 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 SLC35A4Q96G79 324 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 OSGIN1Q9UJX0 560 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 POLR2AP24928 1970 aaKnown RBP13.81□□□□□ -0.2
NPHP4-201ENST00000378156 IGLV3-16A0A075B6K0 115 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 RBMS2Q15434 407 aaKnown RBP13.81□□□□□ -0.2
NPHP4-201ENST00000378156 STK11Q15831 433 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 DPY19L4Q7Z388 723 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 ZNF679Q8IYX0 411 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 FRMD1Q8N878 549 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 OR5T1Q8NG75 326 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 SLC25A46Q96AG3 418 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 DNTTIP1Q9H147 329 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 NXF5Q9H1B4 397 aaKnown RBP13.81□□□□□ -0.2
NPHP4-201ENST00000378156 ZC3H12DA2A288 527 aaKnown RBP13.81□□□□□ -0.2
NPHP4-201ENST00000378156 ZNF136P52737 540 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 YBX1P67809 324 aaKnown RBP13.81□□□□□ -0.2
NPHP4-201ENST00000378156 YOD1Q5VVQ6 348 aaPredicted RBP13.81□□□□□ -0.2
NPHP4-201ENST00000378156 MARCH3Q86UD3 253 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 SLC2A12Q8TD20 617 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 EMC7Q9NPA0 242 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 COPS3Q9UNS2 423 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 A8MVM7 634 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 ICMTO60725 284 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 SLC2A10O95528 541 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 MAKP20794 623 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 TGM4P49221 684 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 MTNR1BP49286 362 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 SLC35A1P78382 337 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 KLHDC8BQ8IXV7 354 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 FBXL6Q8N531 539 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 RCBTB1Q8NDN9 531 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 OR52N1Q8NH53 320 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 SLC35B4Q969S0 331 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 OPALINQ96PE5 141 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 SLC25A31Q9H0C2 315 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 PLEKHJ1Q9NW61 149 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 B3GNT2Q9NY97 397 aa13.81□□□□□ -0.2
NPHP4-201ENST00000378156 ZNF831Q5JPB2 1677 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 IGHV3-20A0A0C4DH32 117 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 TMEM129A0AVI4 362 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 DDOSTP39656 456 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 EIF1P41567 113 aaKnown RBP13.8□□□□□ -0.2
NPHP4-201ENST00000378156 CAPZBP47756 277 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 SPOCK1Q08629 439 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 GLB1L2Q8IW92 636 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 CNEP1R1Q8N9A8 125 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 TOMM40LQ969M1 308 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 C1orf198Q9H425 327 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 REV1Q9UBZ9 1251 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 KCND3Q9UK17 655 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 WIF1Q9Y5W5 379 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 KCNE1BA0A087WTH5 132 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 RPS10-NUDT3A0A1W2PQS6 291 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 RPS10P46783 165 aaKnown RBP13.8□□□□□ -0.2
NPHP4-201ENST00000378156 SLC22A6Q4U2R8 563 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 APOOLQ6UXV4 268 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 AAED1Q7RTV5 226 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 KIAA1958Q8N8K9 716 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 ZNF454Q8N9F8 522 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 STEAP2Q8NFT2 490 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 CNTNAP3Q9BZ76 1288 aa13.8□□□□□ -0.2
NPHP4-201ENST00000378156 HINT3Q9NQE9 182 aaKnown RBP13.8□□□□□ -0.2
NPHP4-201ENST00000378156 FBXO7Q9Y3I1 522 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms