RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 MPGP29372 298 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 FAUP35544 74 aaKnown RBP15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 TSSK4Q6SA08 328 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 KIRREL2Q6UWL6 708 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 BAHD1Q8TBE0 780 aaPredicted RBP15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 INTS12Q96CB8 462 aaKnown RBP15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 NMNAT3Q96T66 252 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 PURGQ9UJV8 347 aaKnown RBP15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 A0A1B0GTQ1 180 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 IDSB3KWA1 339 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 RDH16O75452 317 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 CD1AP06126 327 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 HOXB2P14652 356 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 RPA2P15927 270 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 MAOBP27338 520 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 RPL4P36578 427 aaKnown RBP15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 ADH7P40394 386 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 RBM34P42696 430 aaKnown RBP15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 ERVK-25P63136 954 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 PON3Q15166 354 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 PCGF3Q3KNV8 242 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 CORO6Q6QEF8 472 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 CSNK1A1LQ8N752 337 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 BPIFCQ8NFQ6 507 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 PMM1Q92871 262 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 NARS2Q96I59 477 aaKnown RBP15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 DNTTIP1Q9H147 329 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 POLE3Q9NRF9 147 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 HRASLS2Q9NWW9 162 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 ICAM5Q9UMF0 924 aa15.13■□□□□ 0.01
PCDHA1-201ENST00000378133 HRKO00198 91 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 YKT6O15498 198 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 GPRIN2O60269 458 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 RBBP9O75884 186 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 CTSBP07858 339 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 TNFRSF4P43489 277 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 PPP1CAP62136 330 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 FGL1Q08830 312 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 FAM74A1Q5RGS3 127 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 ELP2Q6IA86 826 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 C15orf40Q8WUR7 153 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 HOXC4P09017 264 aaPredicted RBP15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 HOXA1P49639 335 aaPredicted RBP15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 TFF2Q03403 129 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 NNATQ16517 81 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 ULK3Q6PHR2 472 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 LINC00114Q6XXX2 140 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 TMEM17Q86X19 198 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 ZNF761Q86XN6 746 aaPredicted RBP15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 GLB1L2Q8IW92 636 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 OR6K6Q8NGW6 343 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 ZPLD1Q8TCW7 415 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 NSMAFQ92636 917 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 MIB2Q96AX9 1013 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 PBX4Q9BYU1 374 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 C2orf42Q9NWW7 574 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 NCDNQ9UBB6 729 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 ZNF281Q9Y2X9 895 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 ENTPD2Q9Y5L3 495 aa15.12■□□□□ 0.01
PCDHA1-201ENST00000378133 GON4LQ3T8J9 2241 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 FAM171A2A8MVW0 826 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 CALCBP10092 127 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 S1PR1P21453 382 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 ACHEP22303 614 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 POMGNT2Q8NAT1 580 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 OR4C16Q8NGL9 310 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 OR9A4Q8NGU2 314 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 ASB12Q8WXK4 309 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 TWSG1Q9GZX9 223 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 FKRPQ9H9S5 495 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 MLXQ9UH92 298 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 DTX4Q9Y2E6 619 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 TRAV20A0A0B4J274 112 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 EPOPA6NHQ4 379 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 C2orf74A8MZ97 194 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 KLF8O95600 359 aaPredicted RBP15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 SLC35E2P0CK97 266 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 TMIGD3P0DMS9 266 aaPredicted RBP15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 ITPKBP27987 946 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 GRPRP30550 384 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 STARP49675 285 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 S100A12P80511 92 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 ALG11Q2TAA5 492 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 DEFB110Q30KQ9 67 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 OR14A16Q8NHC5 309 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 HSPA12BQ96MM6 686 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 GABRG3Q99928 467 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 MRI1Q9BV20 369 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 NKX2-4Q9H2Z4 354 aa15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 MKKSQ9NPJ1 570 aaPredicted RBP15.11■□□□□ 0.01
PCDHA1-201ENST00000378133 ALPK2Q86TB3 2170 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 OR6C68A6NDL8 312 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 LINC00587B1AMM8 73 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 APBB3O95704 486 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 DIO1P49895 249 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 SCRN3Q0VDG4 424 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 GAS6Q14393 721 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 ZNHIT3Q15649 155 aaPredicted RBP15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 NPEPL1Q8NDH3 523 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms