RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GLTPQ9NZD2 209 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF346Q9UL40 294 aaKnown RBP11.64□□□□□ -0.55
CKAP2-202ENST00000378034 PKDREJQ9NTG1 2253 aa11.64□□□□□ -0.55
CKAP2-202ENST00000378034 FAM221AA4D161 298 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 A6NNC1 897 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 M0R3G1 203 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 GASTP01350 101 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 THBDP07204 575 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 APEHP13798 732 aaKnown RBP11.63□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF26P17031 533 aaPredicted RBP11.63□□□□□ -0.55
CKAP2-202ENST00000378034 ERFP50548 548 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 FOXG1P55316 489 aaPredicted RBP11.63□□□□□ -0.55
CKAP2-202ENST00000378034 CLRN1P58418 232 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 RFX4Q33E94 735 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 GPR139Q6DWJ6 353 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 ANKRD16Q6P6B7 361 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 OR9Q2Q8NGE9 314 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 OR1K1Q8NGR3 316 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 FANK1Q8TC84 345 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 NRBF2Q96F24 287 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 ALG12Q9BV10 488 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 KATNB1Q9BVA0 655 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 NRIP3Q9NQ35 241 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 GRHPRQ9UBQ7 328 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 AMDHD2Q9Y303 409 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF99A8MXY4 864 aaPredicted RBP11.63□□□□□ -0.55
CKAP2-202ENST00000378034 AHCYL1O43865 530 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 E2F6O75461 281 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 TRMUO75648 421 aaKnown RBP11.63□□□□□ -0.55
CKAP2-202ENST00000378034 TIPRLO75663 272 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 FASP25445 335 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 HOXC12P31275 282 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 SLC6A6P31641 620 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 ACVR1BP36896 505 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 COX10Q12887 443 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 PPP1R8Q12972 351 aaKnown RBP11.63□□□□□ -0.55
CKAP2-202ENST00000378034 PPA1Q15181 289 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 TAB1Q15750 504 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 ATP6AP1Q15904 470 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 CEACAM16Q2WEN9 425 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 PHYHD1Q5SRE7 291 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 C9orf135Q5VTT2 229 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 CD300LDQ6UXZ3 194 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 C22orf34Q6ZV56 151 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF627Q7L945 461 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 IGFN1Q86VF2 1251 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 WDFY1Q8IWB7 410 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 CCDC36Q8IYA8 594 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 CLDN22Q8N7P3 220 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 ARIH2OSQ8N7S6 290 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 AQP11Q8NBQ7 271 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 NOXO1Q8NFA2 376 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 OR10G2Q8NGC3 310 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF519Q8TB69 540 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 TSPAN32Q96QS1 320 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 KCNK17Q96T54 332 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 OR52D1Q9H346 318 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 SMURF2Q9HAU4 748 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 SLC17A5Q9NRA2 495 aa11.63□□□□□ -0.55
CKAP2-202ENST00000378034 FLNBO75369 2602 aaKnown RBP11.62□□□□□ -0.55
CKAP2-202ENST00000378034 IMPA2O14732 288 aa11.62□□□□□ -0.55
CKAP2-202ENST00000378034 ENTPD5O75356 428 aa11.62□□□□□ -0.55
CKAP2-202ENST00000378034 RPS6KA3P51812 740 aa11.62□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF133P52736 654 aaPredicted RBP11.62□□□□□ -0.55
CKAP2-202ENST00000378034 FXYD6P3P58550 94 aa11.62□□□□□ -0.55
CKAP2-202ENST00000378034 ERVK-25P63136 954 aa11.62□□□□□ -0.55
CKAP2-202ENST00000378034 TLE4Q04727 773 aa11.62□□□□□ -0.55
CKAP2-202ENST00000378034 TOP3AQ13472 1001 aaPredicted RBP11.62□□□□□ -0.55
CKAP2-202ENST00000378034 KPNB1Q14974 876 aaKnown RBP11.62□□□□□ -0.55
CKAP2-202ENST00000378034 ZFP1Q6P2D0 407 aa11.62□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF620Q6ZNG0 422 aa11.62□□□□□ -0.55
CKAP2-202ENST00000378034 RASSF6Q6ZTQ3 369 aa11.62□□□□□ -0.55
CKAP2-202ENST00000378034 FAM122BQ7Z309 247 aa11.62□□□□□ -0.55
CKAP2-202ENST00000378034 BCL2L2Q92843 193 aaPredicted RBP11.62□□□□□ -0.55
CKAP2-202ENST00000378034 ZC3HAV1LQ96H79 300 aaKnown RBP11.62□□□□□ -0.55
CKAP2-202ENST00000378034 BDH2Q9BUT1 245 aa11.62□□□□□ -0.55
CKAP2-202ENST00000378034 MOV10Q9HCE1 1003 aaKnown RBP11.62□□□□□ -0.55
CKAP2-202ENST00000378034 POFUT2Q9Y2G5 429 aa11.62□□□□□ -0.55
CKAP2-202ENST00000378034 MAGED1Q9Y5V3 778 aaPredicted RBP11.62□□□□□ -0.55
CKAP2-202ENST00000378034 ARPC3O15145 178 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 IDH3BO43837 385 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 CTAG2O75638 210 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 TXNDC12O95881 172 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 WNT11O96014 354 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 SDHAP31040 664 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 IST1P53990 364 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 ARF1P84077 181 aaKnown RBP11.61□□□□□ -0.55
CKAP2-202ENST00000378034 RUNX1T1Q06455 604 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 ZSCAN26Q16670 478 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 BEX5Q5H9J7 111 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 THEM4Q5T1C6 240 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 SHQ1Q6PI26 577 aaKnown RBP11.61□□□□□ -0.55
CKAP2-202ENST00000378034 LRFN4Q6PJG9 635 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 KLHL24Q6TFL4 600 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 THSD4Q6ZMP0 1018 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 WFDC8Q8IUA0 241 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 HDAC2Q92769 488 aaKnown RBP11.61□□□□□ -0.55
CKAP2-202ENST00000378034 ZNF570Q96NI8 536 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 RBP7Q96R05 134 aa11.61□□□□□ -0.55
CKAP2-202ENST00000378034 FEVQ99581 238 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms