RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.36■□□□□ 0.21
GNE-201ENST00000377902 MED11Q9P086 117 aa16.36■□□□□ 0.21
GNE-201ENST00000377902 GGT3PA6NGU5 568 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 FOXS1O43638 330 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 KCNJ13O60928 360 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 SDC3O75056 442 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 MST1P26927 711 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 GPR143P51810 404 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 CTXN1P60606 82 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 NKAIN2Q5VXU1 208 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 DNM1P46Q6ZS02 220 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.35■□□□□ 0.21
GNE-201ENST00000377902 CDH26Q8IXH8 852 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 PDZD9Q8IXQ8 264 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 PRSS35Q8N3Z0 413 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 BOLLQ8N9W6 283 aaKnown RBP16.35■□□□□ 0.21
GNE-201ENST00000377902 SCARF2Q96GP6 870 aaPredicted RBP16.35■□□□□ 0.21
GNE-201ENST00000377902 ELF4Q99607 663 aaPredicted RBP16.35■□□□□ 0.21
GNE-201ENST00000377902 DPYSL5Q9BPU6 564 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 MED9Q9NWA0 146 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 F5P12259 2224 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 KIAA0100Q14667 2235 aaKnown RBP16.35■□□□□ 0.21
GNE-201ENST00000377902 PLRG1O43660 514 aaKnown RBP16.35■□□□□ 0.21
GNE-201ENST00000377902 AKR7A3O95154 331 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 PLATP00750 562 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 ITGA5P08648 1049 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 RTL10Q7L3V2 364 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 SLC16A9Q7RTY1 509 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 ZNF550Q7Z398 422 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 CSNK1A1LQ8N752 337 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 FRMD1Q8N878 549 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 OR5M9Q8NGP3 310 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 OR6N2Q8NGY6 317 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 LRFN5Q96NI6 719 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 PBX4Q9BYU1 374 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 EXO5Q9H790 373 aa16.35■□□□□ 0.21
GNE-201ENST00000377902 MYEF2Q9P2K5 600 aaKnown RBP16.35■□□□□ 0.21
GNE-201ENST00000377902 TRBV5-5A0A0J9YX44 114 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 OR4C45A6NMZ5 311 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 OIP5O43482 229 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 EGFP01133 1207 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 CCR4P51679 360 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 RPS4XP62701 263 aaKnown RBP16.34■□□□□ 0.21
GNE-201ENST00000377902 ZNHIT3Q15649 155 aaPredicted RBP16.34■□□□□ 0.21
GNE-201ENST00000377902 FAM122BQ7Z309 247 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 OR2G2Q8NGZ5 317 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 MRPL48Q96GC5 212 aaKnown RBP16.34■□□□□ 0.21
GNE-201ENST00000377902 VSTM2LQ96N03 204 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 POLE3Q9NRF9 147 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 STEAP1Q9UHE8 339 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 ETV7Q9Y603 341 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 C2orf16Q68DN1 1984 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 LDOC1O95751 146 aaPredicted RBP16.34■□□□□ 0.21
GNE-201ENST00000377902 TACSTD2P09758 323 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 CALCRP30988 508 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 POU3F4P49335 361 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 TFF2Q03403 129 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 ENPP2Q13822 863 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 C1orf53Q5VUE5 145 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 ZNF776Q68DI1 518 aaPredicted RBP16.34■□□□□ 0.21
GNE-201ENST00000377902 TMED4Q7Z7H5 227 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 POFUT1Q9H488 388 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 LDAHQ9H6V9 325 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 EVA1AQ9H8M9 152 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 FAM60AQ9NP50 221 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 LAMP5Q9UJQ1 280 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 HRH3Q9Y5N1 445 aa16.34■□□□□ 0.21
GNE-201ENST00000377902 TRAV14DV4A0A0A6YYC5 116 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 D6RAR5 112 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 SLC35E2P0CK97 266 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 TPMTP51580 245 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 DMWDQ09019 674 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 ETFDHQ16134 617 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 BEX5Q5H9J7 111 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 SLC6A19Q695T7 634 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 ZNF227Q86WZ6 799 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 SLC43A2Q8N370 569 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 EXD3Q8N9H8 876 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 OR6N1Q8NGY5 312 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 SLC25A28Q96A46 364 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 LMF2Q9BU23 707 aaKnown RBP16.33■□□□□ 0.21
GNE-201ENST00000377902 WDR13Q9H1Z4 485 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 ZMAT3Q9HA38 289 aaKnown RBP16.33■□□□□ 0.21
GNE-201ENST00000377902 FANCMQ8IYD8 2048 aa16.33■□□□□ 0.21
GNE-201ENST00000377902 NPIPB9F8W1W9 429 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 HPP00738 406 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 MPGP29372 298 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 FAUP35544 74 aaKnown RBP16.33■□□□□ 0.2
GNE-201ENST00000377902 BTG2P78543 158 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 GRM7Q14831 915 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 UBXN2BQ14CS0 331 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 C2orf76Q3KRA6 126 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 ANKRD16Q6P6B7 361 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 CBLN3Q6UW01 205 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 TMEM205Q6UW68 189 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 NAXDQ8IW45 347 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 MARC2Q969Z3 335 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 KXD1Q9BQD3 176 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 PRDM9Q9NQV7 894 aa16.33■□□□□ 0.2
GNE-201ENST00000377902 FBXO4Q9UKT5 387 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms