RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 ZNF704Q6ZNC4 412 aaPredicted RBP9.96□□□□□ -0.81
HIF3A-205ENST00000377670 ZNF583Q96ND8 569 aa9.96□□□□□ -0.81
HIF3A-205ENST00000377670 SAP130Q9H0E3 1048 aa9.96□□□□□ -0.81
HIF3A-205ENST00000377670 CLMPQ9H6B4 373 aa9.96□□□□□ -0.81
HIF3A-205ENST00000377670 EVA1AQ9H8M9 152 aa9.96□□□□□ -0.81
HIF3A-205ENST00000377670 USP36Q9P275 1121 aaKnown RBP9.96□□□□□ -0.81
HIF3A-205ENST00000377670 CABIN1Q9Y6J0 2220 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 AIFM1O95831 613 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 MLLT11Q13015 90 aaPredicted RBP9.96□□□□□ -0.82
HIF3A-205ENST00000377670 VEZF1Q14119 521 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 AFMIDQ63HM1 303 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 NLRC3Q7RTR2 1065 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 PLPP6Q8IY26 295 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 SDR9C7Q8NEX9 313 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 FCRL1Q96LA6 429 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 SLC6A20Q9NP91 592 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 ZNF780AO75290 641 aaPredicted RBP9.96□□□□□ -0.82
HIF3A-205ENST00000377670 CRTAPO75718 401 aaPredicted RBP9.96□□□□□ -0.82
HIF3A-205ENST00000377670 PDGFAP04085 211 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 PPP3CBP16298 524 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 PFN3P60673 137 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 ELAVL1Q15717 326 aaKnown RBP9.96□□□□□ -0.82
HIF3A-205ENST00000377670 CD163Q86VB7 1156 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 FUNDC1Q8IVP5 155 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 FOXRED1Q96CU9 486 aaPredicted RBP9.96□□□□□ -0.82
HIF3A-205ENST00000377670 SYT3Q9BQG1 590 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 PLEKHA3Q9HB20 300 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 MYOTQ9UBF9 498 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 TP53TG5Q9Y2B4 290 aa9.96□□□□□ -0.82
HIF3A-205ENST00000377670 ZNF169Q14929 603 aaPredicted RBP9.95□□□□□ -0.82
HIF3A-205ENST00000377670 LTB4RQ15722 352 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 HENMT1Q5T8I9 393 aaKnown RBP9.95□□□□□ -0.82
HIF3A-205ENST00000377670 SFTPA1Q8IWL2 248 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 OR5M9Q8NGP3 310 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 GPBAR1Q8TDU6 330 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 B3GAT1Q9P2W7 334 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 KRBOX1C9JBD0 128 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 HSBP1L1C9JCN9 74 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 GABRPO00591 440 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 TGM6O95932 706 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 NDUFB7P17568 137 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 HLA-DMAP28067 261 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 ZNF92Q03936 586 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 DPY19L4Q7Z388 723 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 SPRED1Q7Z699 444 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 SGPP2Q8IWX5 399 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 CENPOQ9BU64 300 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 TCEAL2Q9H3H9 227 aaPredicted RBP9.95□□□□□ -0.82
HIF3A-205ENST00000377670 BTNL2Q9UIR0 455 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 DNAJB6O75190 326 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 EPHA8P29322 1005 aaPredicted RBP9.95□□□□□ -0.82
HIF3A-205ENST00000377670 POLR2IP36954 125 aaKnown RBP9.95□□□□□ -0.82
HIF3A-205ENST00000377670 TAS2R20P59543 309 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 SQSTM1Q13501 440 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 OR2G6Q5TZ20 316 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 HACD4Q5VWC8 232 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 OR2A2Q6IF42 318 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 ZNF695Q8IW36 515 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 ZNF454Q8N9F8 522 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 SLC38A1Q9H2H9 487 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 FBXL2Q9UKC9 423 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 OR51B4Q9Y5P0 310 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 TSPAN11A1L157 253 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 ABCD4O14678 606 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 GSTP1P09211 210 aaKnown RBP9.95□□□□□ -0.82
HIF3A-205ENST00000377670 CD79BP40259 229 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 ARL6IP1Q15041 203 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 SLCO4C1Q6ZQN7 724 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 C1orf87Q8N0U7 546 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 ADAMTS16Q8TE57 1224 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 PLA2G2FQ9BZM2 168 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 TAS2R16Q9NYV7 291 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 OSGIN1Q9UJX0 560 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 SLC5A6Q9Y289 635 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 SLC22A20A6NK97 555 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 MPIG6BO95866 241 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 PKLRP30613 574 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 RFC3P40938 356 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 EDDM3BP56851 147 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 RRAS2P62070 204 aaPredicted RBP9.95□□□□□ -0.82
HIF3A-205ENST00000377670 ADARB1P78563 741 aaKnown RBP9.95□□□□□ -0.82
HIF3A-205ENST00000377670 MED25Q71SY5 747 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 VRK2Q86Y07 508 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 LYSMD2Q8IV50 215 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 OR4K15Q8NH41 348 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 FGF11Q92914 225 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 RBPMSQ93062 196 aaKnown RBP9.95□□□□□ -0.82
HIF3A-205ENST00000377670 ARSGQ96EG1 525 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 UQCC2Q9BRT2 126 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 LANCL2Q9NS86 450 aa9.95□□□□□ -0.82
HIF3A-205ENST00000377670 RNASET2O00584 256 aaKnown RBP9.94□□□□□ -0.82
HIF3A-205ENST00000377670 PEX11BO96011 259 aa9.94□□□□□ -0.82
HIF3A-205ENST00000377670 RAB4AP20338 218 aa9.94□□□□□ -0.82
HIF3A-205ENST00000377670 ETV1P50549 477 aa9.94□□□□□ -0.82
HIF3A-205ENST00000377670 MRPS10P82664 201 aaKnown RBP9.94□□□□□ -0.82
HIF3A-205ENST00000377670 TAGLNQ01995 201 aaKnown RBP9.94□□□□□ -0.82
HIF3A-205ENST00000377670 Q6ZNB5 142 aa9.94□□□□□ -0.82
HIF3A-205ENST00000377670 OR10K1Q8NGX5 313 aa9.94□□□□□ -0.82
HIF3A-205ENST00000377670 OCEL1Q9H607 264 aa9.94□□□□□ -0.82
HIF3A-205ENST00000377670 GALNT9Q9HCQ5 603 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms