RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 LIPHQ8WWY8 451 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 TMEM54Q969K7 222 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 FNDC11Q9BVV2 318 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 CA10Q9NS85 328 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 C20orf141Q9NUB4 165 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 GLTPQ9NZD2 209 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 STX18Q9P2W9 335 aaKnown RBP14.63□□□□□ -0.07
HMGN4-201ENST00000377575 GDF2Q9UK05 429 aaPredicted RBP14.63□□□□□ -0.07
HMGN4-201ENST00000377575 PMF1-BGLAPU3KQ54 211 aa14.63□□□□□ -0.07
HMGN4-201ENST00000377575 NSD1Q96L73 2696 aaPredicted RBP14.63□□□□□ -0.07
HMGN4-201ENST00000377575 PDE5AO76074 875 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 PGA4P0DJD7 388 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 PGA3P0DJD8 388 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 CD79AP11912 226 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 CLRN1P58418 232 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 SNRPD2P62316 118 aaKnown RBP14.62□□□□□ -0.07
HMGN4-201ENST00000377575 TNK1Q13470 666 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 RAB35Q15286 201 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 GSG1Q2KHT4 349 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 ARFGEF3Q5TH69 2177 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 FKBP9P1Q75LS8 142 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 NUP37Q8NFH4 326 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 IL17RDQ8NFM7 739 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 HSH2DQ96JZ2 352 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 DENND2DQ9H6A0 471 aaPredicted RBP14.62□□□□□ -0.07
HMGN4-201ENST00000377575 INIPQ9NRY2 104 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 RPS6KA6Q9UK32 745 aa14.62□□□□□ -0.07
HMGN4-201ENST00000377575 ZNF503-AS2A6NEH8 195 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 CENPBD1B2RD01 187 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 PIP5K1CO60331 668 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 NDUFS7O75251 213 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 GMNNO75496 209 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 UBL3O95164 117 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 RAB36O95755 333 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 HLA-HP01893 362 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 CELA3BP08861 270 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 CALCRP30988 508 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 AQP2P41181 271 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 TRAM2Q15035 370 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 PIWIL3Q7Z3Z3 882 aaKnown RBP14.61□□□□□ -0.07
HMGN4-201ENST00000377575 CYP4Z1Q86W10 505 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 NOXO1Q8NFA2 376 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 BPIFA2Q96DR5 249 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 FBXO17Q96EF6 278 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 SEC61A2Q9H9S3 476 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 ADA2Q9NZK5 511 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 FBXL3Q9UKT7 428 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 NIPBLQ6KC79 2804 aaeCLIP14.61□□□□□ -0.07
HMGN4-201ENST00000377575 CR1P17927 2039 aa14.61□□□□□ -0.07
HMGN4-201ENST00000377575 ZANQ9Y493 2812 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 IGHV2OR16-5A0A0B4J2B6 119 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 NPIPB13A6NJU9 1138 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 NPIPB4C9JG80 1138 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 SSX4O60224 188 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 DCTN3O75935 186 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 FARS2O95363 451 aaKnown RBP14.6□□□□□ -0.07
HMGN4-201ENST00000377575 LY6G6DO95868 133 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 F13BP05160 661 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 TSPAN19P0C672 248 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 NR2C1P13056 603 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 IFI30P13284 250 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 SERPINF1P36955 418 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 YAP1P46937 504 aaKnown RBP14.6□□□□□ -0.07
HMGN4-201ENST00000377575 GYS2P54840 703 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 DSCR9P59020 149 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 VHLLQ6RSH7 139 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 CLEC2AQ6UVW9 174 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 Q71RC1 249 aaPredicted RBP14.6□□□□□ -0.07
HMGN4-201ENST00000377575 MYPOPQ86VE0 399 aaPredicted RBP14.6□□□□□ -0.07
HMGN4-201ENST00000377575 ASB10Q8WXI3 467 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 ZNF442Q9H7R0 627 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 B3GNT2Q9NY97 397 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 FBXO9Q9UK97 447 aaPredicted RBP14.6□□□□□ -0.07
HMGN4-201ENST00000377575 HIF3AQ9Y2N7 669 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 ARL2BPQ9Y2Y0 163 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 SNX13Q9Y5W8 968 aa14.6□□□□□ -0.07
HMGN4-201ENST00000377575 VSTM5A8MXK1 200 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 B9A039 149 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 RNF223E7ERA6 249 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 J3KTA2 159 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 DHHO43323 396 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 QDPRP09417 244 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 OR8G3PP0DMU2 310 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 SAGP10523 405 aaPredicted RBP14.59□□□□□ -0.07
HMGN4-201ENST00000377575 NCK1P16333 377 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 PTDSS1P48651 473 aaKnown RBP14.59□□□□□ -0.07
HMGN4-201ENST00000377575 ZNF84P51523 738 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 TAF11Q15544 211 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 SWI5Q1ZZU3 235 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 ALG10Q5BKT4 473 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 ZNF730Q6ZMV8 503 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 DNM1P46Q6ZS02 220 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 NRMQ8IXM6 262 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 RNF113BQ8IZP6 322 aaKnown RBP14.59□□□□□ -0.07
HMGN4-201ENST00000377575 SLC22A24Q8N4F4 322 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 ACOT11Q8WXI4 607 aaPredicted RBP14.59□□□□□ -0.07
HMGN4-201ENST00000377575 LRRC37BQ96QE4 947 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 RHNO1Q9BSD3 238 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 MAN2C1Q9NTJ4 1040 aa14.59□□□□□ -0.07
HMGN4-201ENST00000377575 TMEM38BQ9NVV0 291 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms