RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TMEM129A0AVI4 362 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 CENPBD1B2RD01 187 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 TCF21O43680 179 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 SEC14L2O76054 403 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 HPRP00739 348 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 TFP02787 698 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 MT-ND5P03915 603 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 SERPINA5P05154 406 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 NR2C1P13056 603 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 ZNF35P13682 527 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 HLA-DOBP13765 273 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 ACHEP22303 614 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 GPR6P46095 362 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-204ENST00000376643 GIPRP48546 466 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 CDH15P55291 814 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 BIDP55957 195 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 PCBP3P57721 371 aaKnown RBP12.72□□□□□ -0.37
HDAC6-204ENST00000376643 PIGFQ07326 219 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 ZP4Q12836 540 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 RIN1Q13671 783 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 KRTAP24-1Q3LI83 254 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 SLC36A2Q495M3 483 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 GLIPR1L2Q4G1C9 344 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 RUNDC3AQ59EK9 446 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 TMEM53Q6P2H8 277 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 UNQ6126/PRO20091Q6UXV3 157 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 SLC35D2Q76EJ3 337 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 MYPOPQ86VE0 399 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-204ENST00000376643 GLCCI1Q86VQ1 547 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 DPP10Q8N608 796 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 OR1J2Q8NGS2 313 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 SNX33Q8WV41 574 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 RDH5Q92781 318 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 SLC25A44Q96H78 314 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-204ENST00000376643 MOGAT1Q96PD6 335 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 SNX18Q96RF0 628 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 ARHGDIGQ99819 225 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 EBF4Q9BQW3 602 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 GLTPQ9NZD2 209 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 ZNF229Q9UJW7 825 aa12.72□□□□□ -0.37
HDAC6-204ENST00000376643 A0A1W2PPW3 197 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 LRP5LA4QPB2 252 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 TRAPPC13A5PLN9 417 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 GMNCA6NCL1 334 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 ZNF503-AS2A6NEH8 195 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 HAX1O00165 279 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 RNF13O43567 381 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 LILRA1O75019 489 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 SERPINI2O75830 405 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 IGHG1P01857 330 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 CD247P20963 164 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 TMEM33P57088 247 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 PLP2Q04941 152 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 NPTX1Q15818 432 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 ZNF74Q16587 644 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 PCGF3Q3KNV8 242 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 PHYHD1Q5SRE7 291 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 LINC00114Q6XXX2 140 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 SMYD1Q8NB12 490 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 C1orf159Q96HA4 380 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 TXNDC15Q96J42 360 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 ATP6V1G3Q96LB4 118 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 SH3GL1Q99961 368 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 MRPL37Q9BZE1 423 aaKnown RBP12.71□□□□□ -0.37
HDAC6-204ENST00000376643 POLR2J2Q9GZM3 115 aaKnown RBP12.71□□□□□ -0.37
HDAC6-204ENST00000376643 POLR2J3Q9H1A7 115 aaKnown RBP12.71□□□□□ -0.37
HDAC6-204ENST00000376643 KCNN2Q9H2S1 579 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 SLC52A3Q9NQ40 469 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 SLCO1C1Q9NYB5 712 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 GRIP1Q9Y3R0 1128 aa12.71□□□□□ -0.37
HDAC6-204ENST00000376643 A0A0A6YYJ9 748 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 C11orf98E9PRG8 122 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 M0QX08 132 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 M0R3H8 397 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 BCL10O95999 233 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 UMPSP11172 480 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 ANPEPP15144 967 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 PCGF2P35227 344 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 ZNF84P51523 738 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 TEKQ02763 1124 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 FXNQ16595 210 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 TBC1D28Q2M2D7 210 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 FAM209AQ5JX71 171 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 ENTPD8Q5MY95 495 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 RGS7BPQ6MZT1 257 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-204ENST00000376643 DLEU7Q6UYE1 221 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 IL17RELQ6ZVW7 336 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 NANOGNBQ7Z5D8 188 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 COMTD1Q86VU5 262 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 SLC22A24Q8N4F4 322 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 ADAMTS16Q8TE57 1224 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 TMEM54Q969K7 222 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 MS4A3Q96HJ5 214 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 CGREF1Q99674 301 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 BCL2L14Q9BZR8 327 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 PCDHAC1Q9H158 963 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 TPK1Q9H3S4 243 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 IKZF5Q9H5V7 419 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 RNF121Q9H920 327 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 CDH20Q9HBT6 801 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms