RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 AQP7O14520 342 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 CEBPBP17676 345 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 CRMP1Q14194 572 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 OPN5Q6U736 354 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 SLC46A3Q7Z3Q1 461 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 RNF141Q8WVD5 230 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 NMES1Q9C002 83 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 MED20Q9H944 212 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 MED17Q9NVC6 651 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 PNPP00491 289 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 CD38P28907 300 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 EIF1P41567 113 aaKnown RBP11.57□□□□□ -0.56
VPS13A-204ENST00000376634 SELPLGQ14242 412 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 ZFP90Q8TF47 636 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 MAKP20794 623 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 UBE2G1P62253 170 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 ALKAL2Q6UX46 152 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 BPIFCQ8NFQ6 507 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 EMG1Q92979 244 aaKnown RBP11.57□□□□□ -0.56
VPS13A-204ENST00000376634 URGCP-MRPS24S4R325 110 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 FAM183AA6NL82 134 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 HLA-FP30511 346 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 HOXC5Q00444 222 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 CDC20BQ86Y33 519 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 TMPRSS5Q9H3S3 457 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF331Q9NQX6 463 aaPredicted RBP11.57□□□□□ -0.56
VPS13A-204ENST00000376634 PRSS56P0CW18 603 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 SDC1P18827 310 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 CARD18P57730 90 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 SMAD2Q15796 467 aaKnown RBP11.57□□□□□ -0.56
VPS13A-204ENST00000376634 HNRNPA1L2Q32P51 320 aaKnown RBP11.57□□□□□ -0.56
VPS13A-204ENST00000376634 SLC35D2Q76EJ3 337 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 SSX7Q7RTT5 188 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 ADGRE4PQ86SQ3 457 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 FGGYQ96C11 551 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 WDR76Q9H967 626 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 UFSP2Q9NUQ7 469 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 HSD17B6O14756 317 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 PRLHRP49683 370 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 ACSM1Q08AH1 577 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 ARHGAP11BQ3KRB8 267 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 LRRC56Q8IYG6 542 aaPredicted RBP11.56□□□□□ -0.56
VPS13A-204ENST00000376634 RNF113BQ8IZP6 322 aaKnown RBP11.56□□□□□ -0.56
VPS13A-204ENST00000376634 SLC22A24Q8N4F4 322 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 OR5H6Q8NGV6 325 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 DUSP19Q8WTR2 217 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 SLCO5A1Q9H2Y9 848 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 HEYLQ9NQ87 328 aaPredicted RBP11.56□□□□□ -0.56
VPS13A-204ENST00000376634 ZFP92A6NM28 416 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 SCRG1O75711 98 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 ARSAP15289 507 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF140P52738 457 aaPredicted RBP11.56□□□□□ -0.56
VPS13A-204ENST00000376634 SIRPAP78324 504 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 TESK1Q15569 626 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.56□□□□□ -0.56
VPS13A-204ENST00000376634 UTP4Q969X6 686 aaKnown RBP11.56□□□□□ -0.56
VPS13A-204ENST00000376634 SOX7Q9BT81 388 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.56□□□□□ -0.56
VPS13A-204ENST00000376634 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.56□□□□□ -0.56
VPS13A-204ENST00000376634 XRCC3O43542 346 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 NXPH3O95157 252 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 PMP2P02689 132 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 DTYMKP23919 212 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 NPY5RQ15761 445 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 CISD2Q8N5K1 135 aaKnown RBP11.56□□□□□ -0.56
VPS13A-204ENST00000376634 NDFIP1Q9BT67 221 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 LMAN1LQ9HAT1 526 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 CEPT1Q9Y6K0 416 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 RREB1Q92766 1687 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 TRBV4-1A0A0J9YWV2 114 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 LOC100289279A0A1B0GTE1 492 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 SCCPDHQ8NBX0 429 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF251Q9BRH9 671 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 DEGS1O15121 323 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 SLC16A6O15403 523 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 F13BP05160 661 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 FGF4P08620 206 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 NME2P22392 152 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 ITGB8P26012 769 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 BLVRBP30043 206 aaPredicted RBP11.56□□□□□ -0.56
VPS13A-204ENST00000376634 AIFM1O95831 613 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 MT-ND4LP03901 98 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 SLC1A3P43003 542 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 EDDM3BP56851 147 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 ESPNLQ6ZVH7 1005 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 NTMT1Q9BV86 223 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 C1GALT1Q9NS00 363 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 V9GYS6 101 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 BMP1P13497 986 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 NAGAP17050 411 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 BIDP55957 195 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 HBA1P69905 142 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 GPLD1P80108 840 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 TNFRSF17Q02223 184 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 RNF32Q9H0A6 362 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 CLMPQ9H6B4 373 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 MOB1AQ9H8S9 216 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 CALHM2Q9HA72 323 aa11.56□□□□□ -0.56
VPS13A-204ENST00000376634 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.56□□□□□ -0.56
VPS13A-204ENST00000376634 SMIM17P0DL12 118 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms