RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 OR13C5Q8NGS8 318 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 OR14A16Q8NHC5 309 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 ZNF501Q96CX3 271 aaPredicted RBP12.69□□□□□ -0.38
MSH5-202ENST00000375740 NMNAT2Q9BZQ4 307 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 ATPIF1Q9UII2 106 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 C17orf51A8MQB3 221 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 FAM171A2A8MVW0 826 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 SELENOFO60613 162 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 SULT1A3P0DMM9 295 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 SULT1A4P0DMN0 295 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 TACR3P29371 465 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 IL12BP29460 328 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 CBX5P45973 191 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 DCAF7P61962 342 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 OPCMLQ14982 345 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 SHBQ15464 509 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 ISXQ2M1V0 245 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 NLRC3Q7RTR2 1065 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 MARCH3Q86UD3 253 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 SAMD12Q8N8I0 201 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 LIPHQ8WWY8 451 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 DAZLQ92904 295 aaKnown RBP12.69□□□□□ -0.38
MSH5-202ENST00000375740 KTI12Q96EK9 354 aaPredicted RBP12.69□□□□□ -0.38
MSH5-202ENST00000375740 PELI1Q96FA3 418 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 OR2M2Q96R28 347 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 GPX7Q96SL4 187 aaPredicted RBP12.69□□□□□ -0.38
MSH5-202ENST00000375740 USB1Q9BQ65 265 aaKnown RBP12.69□□□□□ -0.38
MSH5-202ENST00000375740 VN1R1Q9GZP7 353 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 LAT2Q9GZY6 243 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 DPAGT1Q9H3H5 408 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 MMP25Q9NPA2 562 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 NKIRAS2Q9NYR9 191 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 ADAM30Q9UKF2 790 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 COPS3Q9UNS2 423 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 HIF3AQ9Y2N7 669 aa12.69□□□□□ -0.38
MSH5-202ENST00000375740 A0A1B0GX78 115 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 OGG1O15527 345 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 SSNA1O43805 119 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 SC5DO75845 299 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 PLATP00750 562 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 CAPZA2P47755 286 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 OR10A3P58181 314 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 ZNF117Q03924 483 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 RGS7BPQ6MZT1 257 aaPredicted RBP12.68□□□□□ -0.38
MSH5-202ENST00000375740 LEG1Q6P5S2 330 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 WDR74Q6RFH5 385 aaPredicted RBP12.68□□□□□ -0.38
MSH5-202ENST00000375740 SHISA6Q6ZSJ9 500 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 LRRC75AQ8NAA5 344 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 OR6K6Q8NGW6 343 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 SNX33Q8WV41 574 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 ACOT12Q8WYK0 555 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 CACNG6Q9BXT2 260 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 SCPEP1Q9HB40 452 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 CYSLTR2Q9NS75 346 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 FBXL2Q9UKC9 423 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 NUP210LQ5VU65 1888 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 RP1P56715 2156 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 HCRTR2O43614 444 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 TSPAN2O60636 221 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 IGF2P01344 180 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 F13BP05160 661 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 CXCL2P19875 107 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 FOXL2P58012 376 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 CTXN1P60606 82 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 SLC35D3Q5M8T2 416 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 HBMQ6B0K9 141 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 PXKQ7Z7A4 578 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 SIAH3Q8IW03 269 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 COQ8AQ8NI60 647 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 WWTR1Q9GZV5 400 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 ADAM19Q9H013 955 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 LDAHQ9H6V9 325 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 FLVCR2Q9UPI3 526 aa12.68□□□□□ -0.38
MSH5-202ENST00000375740 SLC19A2O60779 497 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 ALDOBP05062 364 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 CD14P08571 375 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 ASAH2BP0C7U1 165 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 TSPAN5P62079 268 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 ACTA2P62736 377 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 ACTG2P63267 376 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 TOMM34Q15785 309 aaPredicted RBP12.67□□□□□ -0.38
MSH5-202ENST00000375740 ALG10Q5BKT4 473 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 ALKAL2Q6UX46 152 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 LANCL3Q6ZV70 420 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 FAM122BQ7Z309 247 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 KMT5CQ86Y97 462 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 SYS1Q8N2H4 156 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 OR1N1Q8NGS0 311 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 THAP4Q8WY91 577 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 CCDC74AQ96AQ1 378 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 NCDNQ9UBB6 729 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 SCP2D1Q9UJQ7 156 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 GNG8Q9UK08 70 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 ATXN7L1Q9ULK2 861 aaPredicted RBP12.67□□□□□ -0.38
MSH5-202ENST00000375740 ZNF175Q9Y473 711 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 A0A1W2PPK0 400 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 MT-ND4P03905 459 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 NMBP08949 121 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 ITPKBP27987 946 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 THBS2P35442 1172 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms