RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TEX51A0A1B0GUA7 166 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 XRCC3O43542 346 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 ZNF250P15622 560 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 ALOX5APP20292 161 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 ZNF626Q68DY1 528 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 IDO2Q6ZQW0 420 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 GPR148Q8TDV2 347 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 UTP23Q9BRU9 249 aaKnown RBP13.2□□□□□ -0.3
MSH5-201ENST00000375703 GSX2Q9BZM3 304 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 ULBP3Q9BZM4 244 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 NKX2-4Q9H2Z4 354 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 STEAP1Q9UHE8 339 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 FBXO9Q9UK97 447 aaPredicted RBP13.2□□□□□ -0.3
MSH5-201ENST00000375703 TMEM184BQ9Y519 407 aaPredicted RBP13.2□□□□□ -0.3
MSH5-201ENST00000375703 COL4A2P08572 1712 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 SNRPGP15A8MWD9 76 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 H0YC42 278 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 UTS2O95399 124 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 IL33O95760 270 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 GPANK1O95872 356 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 GIPP09681 153 aaPredicted RBP13.2□□□□□ -0.3
MSH5-201ENST00000375703 MST1P26927 711 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 TACR3P29371 465 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 PPM1FP49593 454 aaPredicted RBP13.2□□□□□ -0.3
MSH5-201ENST00000375703 MAZP56270 477 aaKnown RBP13.2□□□□□ -0.3
MSH5-201ENST00000375703 EGR3Q06889 387 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 SERTAD2Q14140 314 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 MAMSTRQ6ZN01 415 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 ZNF227Q86WZ6 799 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 ZNF321PQ8N8H1 164 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 OR51A4Q8NGJ6 313 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 TAAR8Q969N4 342 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 PNO1Q9NRX1 252 aaKnown RBP13.2□□□□□ -0.3
MSH5-201ENST00000375703 TMEM14AQ9Y6G1 99 aa13.2□□□□□ -0.3
MSH5-201ENST00000375703 TRBV5-7A0A0A0MS05 114 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 PLSCR5A0PG75 271 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 TMEM212A6NML5 194 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 GMFGO60234 142 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 ZNF254O75437 659 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 HRGP04196 525 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 RAP2BP61225 183 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 DLX2Q07687 328 aaPredicted RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 HTR4Q13639 388 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 SHHQ15465 462 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 AANATQ16613 207 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 PCGF3Q3KNV8 242 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 CCDC120Q96HB5 630 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 SFXN2Q96NB2 322 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 INTS14Q96SY0 518 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 MNTQ99583 582 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 ELF4Q99607 663 aaPredicted RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 SEMA4CQ9C0C4 833 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 SYT4Q9H2B2 425 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 EXOSC3Q9NQT5 275 aaKnown RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 CLEC1BQ9P126 229 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 GMEB2Q9UKD1 530 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 A8MUA0 341 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 PYCARD-AS1I3L0S3 204 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 L7N2F9 121 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 TPPPO94811 219 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 RRASP10301 218 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 NFYAP23511 347 aaPredicted RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 FAUP35544 74 aaKnown RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 PPICP45877 212 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 MECP2P51608 486 aaKnown RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 COL13A1Q5TAT6 717 aaPredicted RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 EEF1A1P5Q5VTE0 462 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 DNM1P46Q6ZS02 220 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 BPHLQ86WA6 291 aaPredicted RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 PRSS35Q8N3Z0 413 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 MRPL38Q96DV4 380 aaKnown RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 ELMOD3Q96FG2 381 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 KLHDC3Q9BQ90 382 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 NXF5Q9H1B4 397 aaKnown RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 KCNN3Q9UGI6 736 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 TP53BP1Q12888 1972 aaPredicted RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 A0A1W2PPL8 197 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 H7C417 338 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 OR2A4O95047 310 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 NAT2P11245 290 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 CXCL2P19875 107 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 GALNSP34059 522 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 RIPPLY1Q0D2K3 151 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 RASGEF1BQ0VAM2 473 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 KIAA0895LQ68EN5 471 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 PM20D2Q8IYS1 436 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 OR51D1Q8NGF3 324 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 OR52B4Q8NGK2 314 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 PTPMT1Q8WUK0 201 aaPredicted RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 OMA1Q96E52 524 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 DNAJA3Q96EY1 480 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 WDR89Q96FK6 387 aaPredicted RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 DCBLD2Q96PD2 775 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 OR2A7Q96R45 310 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 ADOQ96SZ5 270 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 PELOQ9BRX2 385 aaKnown RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 MTFP1Q9UDX5 166 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 ING1Q9UK53 422 aaPredicted RBP13.19□□□□□ -0.3
MSH5-201ENST00000375703 NUP50Q9UKX7 468 aa13.19□□□□□ -0.3
MSH5-201ENST00000375703 SPEF1Q9Y4P9 236 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms