RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 MICU1Q9BPX6 476 aa15.44■□□□□ 0.06
VARS-215ENST00000375663 B3GAT2Q9NPZ5 323 aa15.44■□□□□ 0.06
VARS-215ENST00000375663 ALKBH4Q9NXW9 302 aa15.44■□□□□ 0.06
VARS-215ENST00000375663 SHPKQ9UHJ6 478 aa15.44■□□□□ 0.06
VARS-215ENST00000375663 DKKL1Q9UK85 242 aa15.44■□□□□ 0.06
VARS-215ENST00000375663 F5H5K5 113 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 FBXO24O75426 580 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 TRAPPC6AO75865 159 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 ATF1P18846 271 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 LIX1LQ8IVB5 337 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 SLC41A2Q96JW4 573 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 SLCO5A1Q9H2Y9 848 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 ZNF442Q9H7R0 627 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 EMC9Q9Y3B6 208 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 ATRXP46100 2492 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 TSPAN11A1L157 253 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 SSX5O60225 188 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 FXYD4P59646 89 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 OR51Q1Q8NH59 317 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 S100PBPQ96BU1 408 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 SLC6A17Q9H1V8 727 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 SPAG17Q6Q759 2223 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 PLA2G10O15496 165 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 CTNSO60931 367 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 HNRNPKP61978 463 aaKnown RBP eCLIP15.43■□□□□ 0.06
VARS-215ENST00000375663 FBLIM1Q8WUP2 373 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 SYT3Q9BQG1 590 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 SMIM3Q9BZL3 60 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 BIN3Q9NQY0 253 aa15.43■□□□□ 0.06
VARS-215ENST00000375663 UBE2J1Q9Y385 318 aaPredicted RBP15.43■□□□□ 0.06
VARS-215ENST00000375663 FITM1A5D6W6 292 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 RPS27P42677 84 aaKnown RBP15.42■□□□□ 0.06
VARS-215ENST00000375663 RSU1Q15404 277 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 ZNF529Q6P280 563 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 OR6M1Q8NGM8 313 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 FAM3CQ92520 227 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 PRDM7Q9NQW5 492 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 SIRT3Q9NTG7 399 aaPredicted RBP15.42■□□□□ 0.06
VARS-215ENST00000375663 CGGBP1Q9UFW8 167 aaPredicted RBP15.42■□□□□ 0.06
VARS-215ENST00000375663 ARPC4-TTLL3A0A0A6YYG9 625 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 CFIP05156 583 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 AADACL4Q5VUY2 407 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 CMIPQ8IY22 773 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 ALPK2Q86TB3 2170 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 POM121BA6NF01 834 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 OPN1LWP04000 364 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 LHX8Q68G74 356 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 C19orf47Q8N9M1 422 aaKnown RBP15.42■□□□□ 0.06
VARS-215ENST00000375663 OR4K15Q8NH41 348 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 PLEKHJ1Q9NW61 149 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 VSX1Q9NZR4 365 aaPredicted RBP15.42■□□□□ 0.06
VARS-215ENST00000375663 PIKFYVEQ9Y2I7 2098 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 TRAV1-2A0A0B4J238 106 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 CTGFP29279 349 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 BDKRB2P30411 391 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 RAET1LQ5VY80 246 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 ZNF679Q8IYX0 411 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 OR4D11Q8NGI4 311 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 KCNJ16Q9NPI9 418 aa15.42■□□□□ 0.06
VARS-215ENST00000375663 GOLGB1Q14789 3259 aaKnown RBP15.41■□□□□ 0.06
VARS-215ENST00000375663 SLC22A23A1A5C7 686 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 UTS2O95399 124 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 CXCL10P02778 98 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 ZNF16P17020 682 aaPredicted RBP15.41■□□□□ 0.06
VARS-215ENST00000375663 AANATQ16613 207 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 ABHD1Q96SE0 405 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 ZNF160Q9HCG1 818 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 ARID2Q68CP9 1835 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 HCRTR1O43613 425 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 SDHBP21912 280 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 GALP22466 123 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 HOXD11P31277 338 aaPredicted RBP15.41■□□□□ 0.06
VARS-215ENST00000375663 CAV2P51636 162 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 NLRC3Q7RTR2 1065 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 FRMD1Q8N878 549 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 OR5B2Q96R09 309 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 RBM24Q9BX46 236 aaKnown RBP15.41■□□□□ 0.06
VARS-215ENST00000375663 NXF2Q9GZY0 626 aaKnown RBP15.41■□□□□ 0.06
VARS-215ENST00000375663 CCSO14618 274 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 DIRAS3O95661 229 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 ZP2Q05996 745 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 RUNX2Q13950 521 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 PPA1Q15181 289 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 CDKN3Q16667 212 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 SENP5Q96HI0 755 aaPredicted RBP15.41■□□□□ 0.06
VARS-215ENST00000375663 SEMA4CQ9C0C4 833 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 POFUT1Q9H488 388 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 LRIT1Q9P2V4 623 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 B3GALT1Q9Y5Z6 326 aa15.41■□□□□ 0.06
VARS-215ENST00000375663 BLACEA4D250 179 aa15.4■□□□□ 0.06
VARS-215ENST00000375663 SULT1C2O00338 296 aa15.4■□□□□ 0.06
VARS-215ENST00000375663 SUSD5O60279 629 aa15.4■□□□□ 0.06
VARS-215ENST00000375663 YPEL5P62699 121 aa15.4■□□□□ 0.06
VARS-215ENST00000375663 USF2Q15853 346 aaPredicted RBP15.4■□□□□ 0.06
VARS-215ENST00000375663 TMEM215Q68D42 235 aa15.4■□□□□ 0.06
VARS-215ENST00000375663 LINC00346Q8IVM7 164 aa15.4■□□□□ 0.06
VARS-215ENST00000375663 LRFN5Q96NI6 719 aa15.4■□□□□ 0.06
VARS-215ENST00000375663 ARPC5LQ9BPX5 153 aa15.4■□□□□ 0.06
VARS-215ENST00000375663 ZNF649Q9BS31 505 aa15.4■□□□□ 0.06
VARS-215ENST00000375663 ZFP57Q9NU63 452 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms