RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 SH3GLB1Q9Y371 365 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 CMAHPQ9Y471 501 aa12.29□□□□□ -0.44
NELFE-201ENST00000375425 YLPM1P49750 1951 aaKnown RBP12.29□□□□□ -0.44
NELFE-201ENST00000375425 RNF13O43567 381 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 SASH3O75995 380 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 STAMBPO95630 424 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 HIST1H2ABP04908 130 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 ERCC1P07992 297 aaPredicted RBP12.28□□□□□ -0.44
NELFE-201ENST00000375425 PATE4P0C8F1 98 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 FAM157CP0CG43 387 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 ZNF35P13682 527 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 APEHP13798 732 aaKnown RBP12.28□□□□□ -0.44
NELFE-201ENST00000375425 DAOP14920 347 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 GIPRP48546 466 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 TRMT5Q32P41 509 aaKnown RBP12.28□□□□□ -0.44
NELFE-201ENST00000375425 HIST3H2AQ7L7L0 130 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 PIWIL3Q7Z3Z3 882 aaKnown RBP12.28□□□□□ -0.44
NELFE-201ENST00000375425 CDK20Q8IZL9 346 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 ARIH2OSQ8N7S6 290 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 HIST1H2ACQ93077 130 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 TMEM54Q969K7 222 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 ZNF566Q969W8 418 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 LRRC58Q96CX6 371 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 MSI2Q96DH6 328 aaKnown RBP12.28□□□□□ -0.44
NELFE-201ENST00000375425 ECSITQ9BQ95 431 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 ZNF426Q9BUY5 554 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 SLC19A3Q9BZV2 496 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 BPESC1Q9GZL8 116 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 DENND2DQ9H6A0 471 aaPredicted RBP12.28□□□□□ -0.44
NELFE-201ENST00000375425 ZNF229Q9UJW7 825 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 LOC100289279A0A1B0GTE1 492 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 IGFBP1P08833 259 aaPredicted RBP12.28□□□□□ -0.44
NELFE-201ENST00000375425 ADRA2AP08913 450 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 ASAH2BP0C7U1 165 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 UMPSP11172 480 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 SF3A3Q12874 501 aaKnown RBP eCLIP12.28□□□□□ -0.445e-7■■■■■ 27.1
NELFE-201ENST00000375425 MELKQ14680 651 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 MSMPQ1L6U9 139 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 RABL3Q5HYI8 236 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 LRFN4Q6PJG9 635 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 CALHM3Q86XJ0 350 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 SKA3Q8IX90 412 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 SLC25A44Q96H78 314 aaPredicted RBP12.28□□□□□ -0.44
NELFE-201ENST00000375425 SH3GL1Q99961 368 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 PRSS27Q9BQR3 290 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 SHARPINQ9H0F6 387 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 DYNLRB1Q9NP97 96 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 MEPEQ9NQ76 525 aaPredicted RBP12.28□□□□□ -0.44
NELFE-201ENST00000375425 LPAR3Q9UBY5 353 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 SPEF1Q9Y4P9 236 aa12.28□□□□□ -0.44
NELFE-201ENST00000375425 RNF212BA8MTL3 300 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 BLOC1S5-TXNDC5H3BN57 136 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 UBL3O95164 117 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 RAB36O95755 333 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 BCL10O95999 233 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 ZNF23P17027 643 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 TNFRSF1BP20333 461 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 GLRXP35754 106 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 EVX1P49640 407 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 RAB39AQ14964 217 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 MMEL1Q495T6 779 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 GKAP1Q5VSY0 366 aaPredicted RBP12.27□□□□□ -0.45
NELFE-201ENST00000375425 FAM166AQ6J272 317 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 CARM1Q86X55 608 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 NKAIN4Q8IVV8 208 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 ZNF786Q8N393 782 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 SLC22A24Q8N4F4 322 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 OR8J3Q8NGG0 315 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 FGFBP3Q8TAT2 258 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 UBASH3BQ8TF42 649 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 MRPL24Q96A35 216 aaKnown RBP12.27□□□□□ -0.45
NELFE-201ENST00000375425 MRPL37Q9BZE1 423 aaKnown RBP12.27□□□□□ -0.45
NELFE-201ENST00000375425 KCNS2Q9ULS6 477 aa12.27□□□□□ -0.45
NELFE-201ENST00000375425 LOC100653049A0A140TA62 436 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 LRP5LA4QPB2 252 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 FXYD1O00168 92 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 DHHO43323 396 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 SHOX2O60902 331 aaPredicted RBP12.26□□□□□ -0.45
NELFE-201ENST00000375425 KRT34O76011 436 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 TGFAP01135 160 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 MT-ND1P03886 318 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 SERPINA5P05154 406 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 QDPRP09417 244 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 PGA4P0DJD7 388 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 PGA3P0DJD8 388 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 OR8G3PP0DMU2 310 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 IGFBP5P24593 272 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 GIFP27352 417 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 ARFIP2P53365 341 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 TAS2R41P59536 307 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 GALK2Q01415 458 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 KLF10Q13118 480 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 ZNF584Q8IVC4 421 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 PFN4Q8NHR9 129 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 ZNF583Q96ND8 569 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 SH3GL3Q99963 347 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 TPK1Q9H3S4 243 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 CHODLQ9H9P2 273 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 MRGBPQ9NV56 204 aa12.26□□□□□ -0.45
NELFE-201ENST00000375425 REV1Q9UBZ9 1251 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms