RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 WWTR1Q9GZV5 400 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 UBQLN4Q9NRR5 601 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 B3GNT2Q9NY97 397 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 KLHL13Q9P2N7 655 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 C19orf25Q9UFG5 118 aaPredicted RBP6□□□□□ -1.45
SMC1A-202ENST00000375340 ETV7Q9Y603 341 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 HBQ1P09105 142 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 PTBP1P26599 531 aaKnown RBP eCLIP6□□□□□ -1.45
SMC1A-202ENST00000375340 POLR2HP52434 150 aaKnown RBP6□□□□□ -1.45
SMC1A-202ENST00000375340 HSD11B2P80365 405 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 MRPS10P82664 201 aaKnown RBP6□□□□□ -1.45
SMC1A-202ENST00000375340 DLX2Q07687 328 aaPredicted RBP6□□□□□ -1.45
SMC1A-202ENST00000375340 ST3GAL2Q16842 350 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 PARM1Q6UWI2 310 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 LYPD8Q6UX82 237 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 KDM8Q8N371 416 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 ASB17Q8WXJ9 295 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF775Q96BV0 537 aaPredicted RBP6□□□□□ -1.45
SMC1A-202ENST00000375340 PELOQ9BRX2 385 aaKnown RBP6□□□□□ -1.45
SMC1A-202ENST00000375340 C20orf24Q9BUV8 137 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 FGF20Q9NP95 211 aaPredicted RBP6□□□□□ -1.45
SMC1A-202ENST00000375340 SLC2A4RGQ9NR83 387 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 IGHA2P01877 340 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 ENDOUP21128 410 aaKnown RBP6□□□□□ -1.45
SMC1A-202ENST00000375340 BDKRB2P30411 391 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 BTG2P78543 158 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 CDK5Q00535 292 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 CNRIP1Q96F85 164 aaPredicted RBP6□□□□□ -1.45
SMC1A-202ENST00000375340 DEFB126Q9BYW3 111 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 APMAPQ9HDC9 416 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 KLK11Q9UBX7 282 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 SBF1O95248 1867 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 RFXAPO00287 272 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 TIGD3Q6B0B8 471 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 LINC00299Q6ZSB3 139 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 CAMKMTQ7Z624 323 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 ESX1Q8N693 406 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 SCGB1C1Q8TD33 95 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 SFXN2Q96NB2 322 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 TRAPPC4Q9Y296 219 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 PRAMEF26H0Y7S4 382 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 ICOSLGO75144 302 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 PRSS53Q2L4Q9 553 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 DMRTC1Q5HYR2 192 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 LAIR1Q6GTX8 287 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 P4HA3Q7Z4N8 544 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 SCARB1Q8WTV0 552 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF416Q9BWM5 594 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 FGF22Q9HCT0 170 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 GDE1Q9NZC3 331 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 SLC7A11Q9UPY5 501 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 OR51B4Q9Y5P0 310 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 TMED7-TICAM2A0A0A6YYA0 188 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 GPR171O14626 319 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 P2RX6O15547 441 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 TXNL1O43396 289 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 MAGEB1P43366 347 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 CAV2P51636 162 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 CORO6Q6QEF8 472 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 C17orf107Q6ZR85 190 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 DCXRQ7Z4W1 244 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 CA13Q8N1Q1 262 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 ZG16BQ96DA0 208 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 ALG14Q96F25 216 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 LDAHQ9H6V9 325 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 TMED7Q9Y3B3 224 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 SCN3AQ9NY46 2000 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF43P17038 809 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 CCR9P51686 369 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 TAS2R20P59543 309 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 OR5D14Q8NGL3 314 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 PRAMEF27A3QJZ7 478 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 G3V3Y1 287 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 LILRB3O75022 631 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 SELENOPP49908 381 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 BIDP55957 195 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 PCBP4P57723 403 aaKnown RBP6□□□□□ -1.45
SMC1A-202ENST00000375340 PRAMEF9Q5VWM5 478 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 PLCXD3Q63HM9 321 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 PAPD4Q6PIY7 484 aaKnown RBP6□□□□□ -1.45
SMC1A-202ENST00000375340 OR8D4Q8NGM9 314 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 OR1E3Q8WZA6 343 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 ST8SIA4Q92187 359 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 STACQ99469 402 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 MIXL1Q9H2W2 232 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 CCDC86Q9H6F5 360 aaKnown RBP6□□□□□ -1.45
SMC1A-202ENST00000375340 CMC2Q9NRP2 79 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 KCNIP3Q9Y2W7 256 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 HSPA12AO43301 675 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 CRB3Q9BUF7 120 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 WASH6PQ9NQA3 447 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 COA3Q9Y2R0 106 aaPredicted RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 A0A0D9SG52 128 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 FCGR2AP12318 317 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 OTX2P32243 289 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 EMP2P54851 167 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 DPTQ07507 201 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 DUSP8Q13202 625 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 ADGRE4PQ86SQ3 457 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 OR13H1Q8NG92 308 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms