RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 SLC35A4Q96G79 324 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 TMEM68Q96MH6 324 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 ATP13A2Q9NQ11 1180 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 OR52A1Q9UKL2 312 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 M0QYG6 137 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 ERVK-16P61578 105 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 HYAL4Q2M3T9 481 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 ZFPM2Q8WW38 1151 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 FAM3CQ92520 227 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 SMIM19Q96E16 107 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 CCL26Q9Y258 94 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 M0R082 166 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 TAAR5O14804 337 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 DDAH2O95865 285 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 ANXA7P20073 488 aaKnown RBP19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 RPS15P62841 145 aaKnown RBP19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 MRPS21P82921 87 aaKnown RBP19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 SLC30A7Q8NEW0 376 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 PFN4Q8NHR9 129 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 SLC6A18Q96N87 628 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 ZBP1Q9H171 429 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 DAPP1Q9UN19 280 aa19.5■□□□□ 0.71
TGFBR1-202ENST00000374994 ZNF93P35789 620 aaPredicted RBP19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 SSBP1Q04837 148 aaKnown RBP19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 ZNF750Q32MQ0 723 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 LIPNQ5VXI9 398 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 OLIG3Q7RTU3 272 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 UCN3Q969E3 161 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 FOXN4Q96NZ1 517 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 DCBLD2Q96PD2 775 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 EXOSC3Q9NQT5 275 aaKnown RBP19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 ACOXLQ9NUZ1 547 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 TMPRSS11DO60235 418 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 SPI1P17947 270 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 EBPQ15125 230 aaKnown RBP19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 SLC16A12Q6ZSM3 486 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 ESPNLQ6ZVH7 1005 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 WDR5BQ86VZ2 330 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 ULBP2Q9BZM5 246 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 ARAP2Q8WZ64 1704 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 PRSS23O95084 383 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 SIX6O95475 246 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 ZNF136P52737 540 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 DEFA6Q01524 100 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 OR5T1Q8NG75 326 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 RHNO1Q9BSD3 238 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 NKX6-2Q9C056 277 aaPredicted RBP19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 A0A1W2PR48 441 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 IAH1Q2TAA2 248 aaPredicted RBP19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 HRASLSQ9HDD0 168 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 OBP2AQ9NY56 170 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 CD63P08962 238 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 ZNF28P17035 718 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 HOXA9P31269 272 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 BSGP35613 385 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 KCNIP4Q6PIL6 250 aa19.49■□□□□ 0.71
TGFBR1-202ENST00000374994 ITGB2P05107 769 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 ACOT7LQ6ZUV0 252 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 PRSS35Q8N3Z0 413 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 KIAA1958Q8N8K9 716 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 Q96M85 177 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 TCEAL2Q9H3H9 227 aaPredicted RBP19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 ZNF629Q9UEG4 869 aaPredicted RBP19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 EMC9Q9Y3B6 208 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 NME2P22392 152 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 EMP3P54852 163 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 EXOSC2Q13868 293 aaKnown RBP19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 CDK5R1Q15078 307 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 PLPP5Q8NEB5 264 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 DVL3Q92997 716 aaPredicted RBP19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 OR2A14Q96R47 310 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 RNF212BA8MTL3 300 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 ZNF705FA8MVS1 300 aaPredicted RBP19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 ZNF705DP0CH99 300 aaPredicted RBP19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 ZNF705BP0CI00 300 aaPredicted RBP19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 KIR2DL3P43628 341 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 ZNF611Q8N823 705 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 RASD2Q96D21 266 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 HHIPL1Q96JK4 782 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 ATF6BQ99941 703 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 POFUT1Q9H488 388 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 TRAV1-2A0A0B4J238 106 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 IFITM5A6NNB3 132 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 SHOXO15266 292 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 HSD17B7P56937 341 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 SERTM1A2A2V5 107 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 SOD1P00441 154 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 BLVRBP30043 206 aaPredicted RBP19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 FAM78AQ5JUQ0 283 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 PLCXD3Q63HM9 321 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 KANSL1Q7Z3B3 1105 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 KDM8Q8N371 416 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 SMIM4Q8WVI0 70 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 RSC1A1Q92681 617 aa19.48■□□□□ 0.71
TGFBR1-202ENST00000374994 TRIM64A6NGJ6 449 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 ZNF728P0DKX0 622 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 RBMS3Q6XE24 437 aaKnown RBP19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 LIMS2Q7Z4I7 341 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 RDH10Q8IZV5 341 aa19.47■□□□□ 0.71
TGFBR1-202ENST00000374994 BCORQ6W2J9 1755 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms