RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 KLHL13Q9P2N7 655 aa13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 WARS2Q9UGM6 360 aaKnown RBP13.04□□□□□ -0.32
SMPDL3B-201ENST00000373888 IGKV3D-15A0A087WSY6 115 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 TRIM64BA6NI03 449 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 SLC22A20A6NK97 555 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 H3BMQ9 156 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 SURF4O15260 269 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 WDR1O75083 606 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 SERPINI2O75830 405 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 AQP8O94778 261 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 FCGR2AP12318 317 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 GABRA1P14867 456 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 NOS3P29474 1203 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 PTGER4P35408 488 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 DAP3P51398 398 aaKnown RBP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 RPL27P61353 136 aaKnown RBP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 EFNB1P98172 346 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ROR2Q01974 943 aaKnown RBP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 PIGFQ07326 219 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 RASGEF1BQ0VAM2 473 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 DYNC1I2Q13409 638 aaKnown RBP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 SF3B4Q15427 424 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ACSF3Q4G176 576 aaPredicted RBP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 UBE2UQ5VVX9 321 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 SLC35D2Q76EJ3 337 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 STX19Q8N4C7 294 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 FAM26EQ8N5C1 309 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ZNF519Q8TB69 540 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 CPT1CQ8TCG5 803 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ABHD3Q8WU67 409 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 GGHQ92820 318 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 COG8Q96MW5 612 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 SLC38A2Q96QD8 506 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 CMC2Q9NRP2 79 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 TVP23BQ9NYZ1 205 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 KLHL9Q9P2J3 617 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 GRHPRQ9UBQ7 328 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ING1Q9UK53 422 aaPredicted RBP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ITGB1BP2Q9UKP3 347 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ZNF346Q9UL40 294 aaKnown RBP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ZNF835Q9Y2P0 537 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 TEX13CA0A0J9YWL9 993 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 IRGMA1A4Y4 181 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 FIGNL2A6NMB9 653 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 TGM6O95932 706 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 BCL10O95999 233 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 TPOP07202 933 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 IFNGR1P15260 489 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 HIST1H1CP16403 213 aaKnown RBP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ABOP16442 354 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 PCYT1AP49585 367 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 MLLT10P55197 1068 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 C1DQ13901 141 aaKnown RBP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 RNPS1Q15287 305 aaKnown RBP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 SNAPC1Q16533 368 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ZNF362Q5T0B9 420 aaPredicted RBP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 SLC35F1Q5T1Q4 408 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ARMC4Q5T2S8 1044 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 FAM205BPQ63HN1 556 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 CREB3L2Q70SY1 520 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 CD163Q86VB7 1156 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ARIH2OSQ8N7S6 290 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 ASB10Q8WXI3 467 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 RASD2Q96D21 266 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 Q96M85 177 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 PRRG4Q9BZD6 226 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 RNF122Q9H9V4 155 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 CALHM2Q9HA72 323 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 AASSQ9UDR5 926 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 RPL36Q9Y3U8 105 aaKnown RBP13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 FLVCR1Q9Y5Y0 555 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 CACNA1BQ00975 2339 aa13.03□□□□□ -0.32
SMPDL3B-201ENST00000373888 IGSF10Q6WRI0 2623 aa13.02□□□□□ -0.32
SMPDL3B-201ENST00000373888 CD8B2A6NJW9 211 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 RIIAD1A6NNX1 92 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 PRKYO43930 277 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 FADS2O95864 444 aaKnown RBP13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 IFNGP01579 166 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 HOXD4P09016 255 aaPredicted RBP13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 ACVR2AP27037 513 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 GP2P55259 537 aaKnown RBP13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 RBPJQ06330 500 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 KRR1Q13601 381 aaKnown RBP13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 MESTQ5EB52 335 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 NSUN5P2Q63ZY6 315 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 ZNF585AQ6P3V2 769 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 PLXDC2Q6UX71 529 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 HDDC2Q7Z4H3 204 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 ZIC4Q8N9L1 334 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 ST6GALNAC3Q8NDV1 305 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 WNT2BQ93097 391 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 TXNDC15Q96J42 360 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 TRIB1Q96RU8 372 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 CDCA4Q9BXL8 241 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 RACGAP1Q9H0H5 632 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 BCO1Q9HAY6 547 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 GP6Q9HCN6 339 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 MED29Q9NX70 200 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 ENPP5Q9UJA9 477 aa13.02□□□□□ -0.33
SMPDL3B-201ENST00000373888 KLHL21Q9UJP4 597 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms