RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 SMAD4Q13485 552 aaKnown RBP11.1□□□□□ -0.63
NCDN-202ENST00000373243 KCNAB1Q14722 419 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 PRAMEF17Q5VTA0 474 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 FAM109BQ6ICB4 259 aaPredicted RBP11.1□□□□□ -0.63
NCDN-202ENST00000373243 RAB12Q6IQ22 244 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 H3F3CQ6NXT2 135 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 KRT77Q7Z794 578 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 ZNF227Q86WZ6 799 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 CMTM4Q8IZR5 234 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 ARMC10Q8N2F6 343 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 OR4N2Q8NGD1 307 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 BRIX1Q8TDN6 353 aaKnown RBP11.1□□□□□ -0.63
NCDN-202ENST00000373243 METTL21AQ8WXB1 218 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 SUCNR1Q9BXA5 334 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.1□□□□□ -0.63
NCDN-202ENST00000373243 VWA8A3KMH1 1905 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 PATJQ8NI35 1801 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 PRICKLE3O43900 615 aaPredicted RBP11.1□□□□□ -0.63
NCDN-202ENST00000373243 PRAMEF2O60811 474 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 IGF2P01344 180 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 MBP02144 154 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 DPTQ07507 201 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 RUNX2Q13950 521 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 HLXQ14774 488 aaPredicted RBP11.1□□□□□ -0.63
NCDN-202ENST00000373243 ADAMTSL4Q6UY14 1074 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 NDUFAF7Q7L592 441 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 TPRA1Q86W33 373 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 MCATQ8IVS2 390 aaKnown RBP11.1□□□□□ -0.63
NCDN-202ENST00000373243 POGLUT1Q8NBL1 392 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 OR52B4Q8NGK2 314 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 SCMH1Q96GD3 660 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 HHIPQ96QV1 700 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 SERINC2Q96SA4 455 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 ASF1BQ9NVP2 202 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 DNAJB6O75190 326 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 GPR75O95800 540 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 C5AR1P21730 350 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 DCTDP32321 178 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 CSF2RBP32927 897 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 C3orf33Q6P1S2 294 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 DPY19L4Q7Z388 723 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 ZNF687Q8N1G0 1237 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 MFSD9Q8NBP5 474 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 OR1S1Q8NH92 325 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 SPPL3Q8TCT6 385 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 DUSP19Q8WTR2 217 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 THAP3Q8WTV1 239 aaPredicted RBP11.1□□□□□ -0.63
NCDN-202ENST00000373243 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
NCDN-202ENST00000373243 HHIPL1Q96JK4 782 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 WDR92Q96MX6 357 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 CHRDQ9H2X0 955 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 C11orf49Q9H6J7 331 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 CMC2Q9NRP2 79 aa11.1□□□□□ -0.63
NCDN-202ENST00000373243 RP1L1Q8IWN7 2480 aaPredicted RBP11.09□□□□□ -0.63
NCDN-202ENST00000373243 PRSS38A1L453 326 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 TCAPO15273 167 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 TIMP1P01033 207 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 HNRNPA1P09651 372 aaKnown RBP eCLIP11.09□□□□□ -0.63
NCDN-202ENST00000373243 NID1P14543 1247 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 NR0B1P51843 470 aaKnown RBP11.09□□□□□ -0.63
NCDN-202ENST00000373243 MANEAQ5SRI9 462 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 HEPHL1Q6MZM0 1159 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 TMUB2Q71RG4 321 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 C7orf61Q8IZ16 206 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 ZNF248Q8NDW4 579 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 TCTEX1D2Q8WW35 142 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 TCEAL7Q9BRU2 100 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 TMEM231Q9H6L2 316 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 PRTFDC1Q9NRG1 225 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 MPTX1A8MV57 137 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 SCDO00767 359 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 SRMP19623 302 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 AKR1C3P42330 323 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 RELQ04864 619 aaPredicted RBP11.09□□□□□ -0.63
NCDN-202ENST00000373243 FUT5Q11128 374 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 PLA2G7Q13093 441 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 FAM76BQ5HYJ3 339 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 ZNF550Q7Z398 422 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 OR51D1Q8NGF3 324 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 RSPRY1Q96DX4 576 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 SEC22AQ96IW7 307 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 ABRACLQ9P1F3 81 aa11.09□□□□□ -0.63
NCDN-202ENST00000373243 A0A1B0GTH9 108 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 ZNF593O00488 134 aaPredicted RBP11.08□□□□□ -0.63
NCDN-202ENST00000373243 SOX1O00570 391 aaPredicted RBP11.08□□□□□ -0.63
NCDN-202ENST00000373243 BRINP1O60477 761 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 LILRB5O75023 590 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 ICOSLGO75144 302 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 ADH1BP00325 375 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 GNRH1P01148 92 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 CA3P07451 260 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 UGT2B7P16662 529 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 FXYD6P3P58550 94 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 RNF212Q495C1 297 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 TMEM52BQ4KMG9 183 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 OR1E3Q8WZA6 343 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 TMEM106AQ96A25 262 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 PIGQQ9BRB3 760 aa11.08□□□□□ -0.63
NCDN-202ENST00000373243 PRUNE2Q8WUY3 3088 aa11.08□□□□□ -0.64
NCDN-202ENST00000373243 ZNF729A6NN14 1252 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms