RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PRRT3Q5FWE3 981 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 LRRTM1Q86UE6 522 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 WNT2BQ93097 391 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 RXFP3Q9NSD7 469 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 DNAJB12Q9NXW2 375 aaKnown RBP13.47□□□□□ -0.25
COL9A2-202ENST00000372748 IKZF2Q9UKS7 526 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 GGT3PA6NGU5 568 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 TVP23AA6NH52 213 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 BLOC1S5-TXNDC5H3BN57 136 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 RAD1O60671 282 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 SRSF5Q13243 272 aaKnown RBP13.47□□□□□ -0.25
COL9A2-202ENST00000372748 NNATQ16517 81 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 MCATQ8IVS2 390 aaKnown RBP13.47□□□□□ -0.25
COL9A2-202ENST00000372748 SAMD14Q8IZD0 417 aaPredicted RBP13.47□□□□□ -0.25
COL9A2-202ENST00000372748 TMEM185AQ8NFB2 350 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 FGF14Q92915 247 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 ADAD1Q96M93 576 aaKnown RBP13.47□□□□□ -0.25
COL9A2-202ENST00000372748 ADAT1Q9BUB4 502 aaKnown RBP13.47□□□□□ -0.25
COL9A2-202ENST00000372748 MRM2Q9UI43 246 aaKnown RBP13.47□□□□□ -0.25
COL9A2-202ENST00000372748 FBXO4Q9UKT5 387 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 SLC6A5Q9Y345 797 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 SLC22A7Q9Y694 548 aa13.47□□□□□ -0.25
COL9A2-202ENST00000372748 RFPL4AA6NLU0 287 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 RFPL4AL1F8VTS6 287 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 H7C1C5 153 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 GPR31O00270 319 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 PLRG1O43660 514 aaKnown RBP13.46□□□□□ -0.25
COL9A2-202ENST00000372748 CSF1P09603 554 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 LIPCP11150 499 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 CDKN2AP42771 156 aaKnown RBP13.46□□□□□ -0.25
COL9A2-202ENST00000372748 LCN6P62502 163 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 LINC01590Q5TEZ4 76 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 PARM1Q6UWI2 310 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 DGAT2L6Q6ZPD8 337 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 OR2A5Q96R48 311 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 SLC25A32Q9H2D1 315 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 SFXN1Q9H9B4 322 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 SRA1Q9HD15 236 aaKnown RBP13.46□□□□□ -0.25
COL9A2-202ENST00000372748 GDE1Q9NZC3 331 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 ZNF337Q9Y3M9 751 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 OR10H1Q9Y4A9 318 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 ETV7Q9Y603 341 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 K7EQS6 105 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 UPK3AO75631 287 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 CTAG2O75638 210 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 ALKBH1Q13686 389 aaKnown RBP13.46□□□□□ -0.25
COL9A2-202ENST00000372748 LY6G6FQ5SQ64 297 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 FAM220AQ7Z4H9 259 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 KRT77Q7Z794 578 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 BEST3Q8N1M1 668 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 PATE1Q8WXA2 126 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 CCDC74AQ96AQ1 378 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 MRPL48Q96GC5 212 aaKnown RBP13.46□□□□□ -0.25
COL9A2-202ENST00000372748 SEC22AQ96IW7 307 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 SERINC2Q96SA4 455 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 BARX1Q9HBU1 254 aaPredicted RBP13.46□□□□□ -0.25
COL9A2-202ENST00000372748 MKKSQ9NPJ1 570 aaPredicted RBP13.46□□□□□ -0.25
COL9A2-202ENST00000372748 STARD5Q9NSY2 213 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 RASL12Q9NYN1 266 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 DOCK8Q8NF50 2099 aa13.46□□□□□ -0.25
COL9A2-202ENST00000372748 GON4LQ3T8J9 2241 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 CCSO14618 274 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 ZNF254O75437 659 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 IGKV1D-16P01601 117 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 AKAIN1P0CW23 69 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 TMEM196Q5HYL7 178 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 ZNF684Q5T5D7 378 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 RNF44Q7L0R7 432 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 NDUFAF7Q7L592 441 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 ZNF227Q86WZ6 799 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 SFTPA2Q8IWL1 248 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 ZNF676Q8N7Q3 588 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 MYADMQ96S97 322 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 LMAN2LQ9H0V9 348 aa13.46□□□□□ -0.26
COL9A2-202ENST00000372748 CDV3Q9UKY7 258 aaKnown RBP13.46□□□□□ -0.26
COL9A2-202ENST00000372748 ZNF98A6NK75 572 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 M0QYG6 137 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 DCTN6O00399 190 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 POU2F2P09086 479 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 MGMTP16455 207 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 PGDP52209 483 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 FLI1Q01543 452 aaPredicted RBP13.45□□□□□ -0.26
COL9A2-202ENST00000372748 ENPP2Q13822 863 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 PRICKLE4Q2TBC4 344 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 PABPC1L2AQ5JQF8 200 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 NKAIN2Q5VXU1 208 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 DNM1P46Q6ZS02 220 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 OR52R1Q8NGF1 315 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 RPS4Y2Q8TD47 263 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 C15orf40Q8WUR7 153 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 STACQ99469 402 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 PTDSS2Q9BVG9 487 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 ZNF471Q9BX82 626 aaPredicted RBP13.45□□□□□ -0.26
COL9A2-202ENST00000372748 TRIM2Q9C040 744 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 ZNF768Q9H5H4 540 aaKnown RBP13.45□□□□□ -0.26
COL9A2-202ENST00000372748 SLC39A1Q9NY26 324 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 GMEB2Q9UKD1 530 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 HEBP2Q9Y5Z4 205 aa13.45□□□□□ -0.26
COL9A2-202ENST00000372748 OR2W5A6NFC9 320 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms