RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 GLT8D1Q68CQ7 371 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 RAB12Q6IQ22 244 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 POMZP3Q6PJE2 187 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 LCTLQ6UWM7 567 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 KCTD9Q7L273 389 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 MDGA2Q7Z553 956 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 SPRED2Q7Z698 418 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 PPP1R3BQ86XI6 285 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 GID4Q8IVV7 300 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 SLC35F2Q8IXU6 374 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 OR6V1Q8N148 313 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 FAM71CQ8NEG0 241 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 OR6S1Q8NH40 331 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF524Q96C55 264 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 NUS1Q96E22 293 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 LCORQ96JN0 433 aaPredicted RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 SDF2Q99470 211 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 C20orf24Q9BUV8 137 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 SELENOIQ9C0D9 397 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 SLC6A15Q9H2J7 730 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 NCOR1P1Q9H4R4 102 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 MBNL1Q9NR56 388 aaKnown RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 PTTG3PQ9NZH4 202 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 MED11Q9P086 117 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 CES1P1Q9UKY3 287 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 ATXN7L1Q9ULK2 861 aaPredicted RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 NPFFR2Q9Y5X5 522 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 V9GY05 133 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 A0A0B4J2A0 478 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 A0A1W2PQ45 241 aaPredicted RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 A0A1W2PQY0 241 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 RAB19A4D1S5 217 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 RNF222A6NCQ9 220 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 FAM86C2PA6NEL3 165 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 SLC22A31A6NKX4 558 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 MPTX1A8MV57 137 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF879B4DU55 563 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 C9JQL5 133 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 TXNL1O43396 289 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 EMC8O43402 210 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 LMX1BO60663 402 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 EML2O95834 649 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 WNT11O96014 354 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 SERPINA3P01011 423 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 CT62P0C5K7 136 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 LAMP2P13473 410 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 PI3P19957 117 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 CNR1P21554 472 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 GNALP38405 381 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 PNLIPRP2P54317 469 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 DLX5P56178 289 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 PPIAP62937 165 aaKnown RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 EEF1A1P68104 462 aaKnown RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 BLOC1S1P78537 153 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 REEP5Q00765 189 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 FLI1Q01543 452 aaPredicted RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 DHODHQ02127 395 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 LTBQ06643 244 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 NKAIN2Q5VXU1 208 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 OR52W1Q6IF63 320 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 H3F3CQ6NXT2 135 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 JMJD6Q6NYC1 403 aaPredicted RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 SLC48A1Q6P1K1 146 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 ABHD17CQ6PCB6 329 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 CLEC9AQ6UXN8 241 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 BEND4Q6ZU67 534 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 SLC35D2Q76EJ3 337 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 AMZ2Q86W34 360 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 MCATQ8IVS2 390 aaKnown RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 SPICQ8N5J4 248 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 GVQW1Q8N7I0 195 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 STEAP2Q8NFT2 490 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 PHOSPHO1Q8TCT1 267 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 TMED6Q8WW62 240 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 SMARCD2Q92925 531 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 S100A16Q96FQ6 103 aaKnown RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF681Q96N22 645 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 MYADMQ96S97 322 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 PELOQ9BRX2 385 aaKnown RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 PDCD10Q9BUL8 212 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 TEX12Q9BXU0 123 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 DNTTIP1Q9H147 329 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 CHRDQ9H2X0 955 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 HRH4Q9H3N8 390 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 TREM1Q9NP99 234 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 NIT2Q9NQR4 276 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 KLHL28Q9NXS3 571 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 RASL12Q9NYN1 266 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 FRRS1LQ9P0K9 344 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 ABRACLQ9P1F3 81 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 CGGBP1Q9UFW8 167 aaPredicted RBP4.93□□□□□ -1.62
ATG4A-204ENST00000372246 SHPKQ9UHJ6 478 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 KCNG2Q9UJ96 466 aa4.93□□□□□ -1.62
ATG4A-204ENST00000372246 MDC1Q14676 2089 aaKnown RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 A0A1B0GV50 99 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 C13orf42A0A1B0GVH6 325 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 A0A1B0GWA3 101 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 A0A1W2PNR3 127 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 UBE2QL1A1L167 161 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 TRAPPC13A5PLN9 417 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms