RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 C20orf196Q8IYI0 205 aa14.4□□□□□ -0.1
TMEM53-203ENST00000372242 GPR137CQ8N3F9 429 aa14.4□□□□□ -0.1
TMEM53-203ENST00000372242 CBR4Q8N4T8 237 aa14.4□□□□□ -0.1
TMEM53-203ENST00000372242 ARIH2OSQ8N7S6 290 aa14.4□□□□□ -0.1
TMEM53-203ENST00000372242 POMGNT2Q8NAT1 580 aa14.4□□□□□ -0.1
TMEM53-203ENST00000372242 OR52L1Q8NGH7 329 aa14.4□□□□□ -0.1
TMEM53-203ENST00000372242 OR6N1Q8NGY5 312 aa14.4□□□□□ -0.1
TMEM53-203ENST00000372242 HDAC2Q92769 488 aaKnown RBP14.4□□□□□ -0.1
TMEM53-203ENST00000372242 ZNF570Q96NI8 536 aa14.4□□□□□ -0.1
TMEM53-203ENST00000372242 TSSK6Q9BXA6 273 aa14.4□□□□□ -0.1
TMEM53-203ENST00000372242 NPDC1Q9NQX5 325 aaPredicted RBP14.4□□□□□ -0.1
TMEM53-203ENST00000372242 KRT84Q9NSB2 600 aa14.4□□□□□ -0.1
TMEM53-203ENST00000372242 NKX1-2Q9UD57 310 aaPredicted RBP14.4□□□□□ -0.1
TMEM53-203ENST00000372242 TMEFF2Q9UIK5 374 aaPredicted RBP14.4□□□□□ -0.1
TMEM53-203ENST00000372242 FOXD3Q9UJU5 478 aaPredicted RBP14.4□□□□□ -0.1
TMEM53-203ENST00000372242 HCFC1P51610 2035 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 H7C1C5 153 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 EI24O14681 340 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 ARHGEF9O43307 516 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 LYZL6O75951 148 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 IGHG1P01857 330 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 OSMP13725 252 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 CDH2P19022 906 aaPredicted RBP14.39□□□□□ -0.11
TMEM53-203ENST00000372242 IGHV1-2P23083 117 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 SDHAP31040 664 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 CSNK1A1P48729 337 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 RPS6KA3P51812 740 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 LCN6P62502 163 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 MYBPC1Q00872 1141 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 MESTQ5EB52 335 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 SLC35F1Q5T1Q4 408 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 STAC2Q6ZMT1 411 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 IQCF1Q8N6M8 205 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 MAGEE2Q8TD90 523 aaPredicted RBP14.39□□□□□ -0.11
TMEM53-203ENST00000372242 RNASE6Q93091 150 aaKnown RBP14.39□□□□□ -0.11
TMEM53-203ENST00000372242 ZNF837Q96EG3 531 aaPredicted RBP14.39□□□□□ -0.11
TMEM53-203ENST00000372242 OSBPL10Q9BXB5 764 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 MRPL13Q9BYD1 178 aaKnown RBP14.39□□□□□ -0.11
TMEM53-203ENST00000372242 DCLRE1BQ9H816 532 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 POFUT2Q9Y2G5 429 aa14.39□□□□□ -0.11
TMEM53-203ENST00000372242 BHLHE40O14503 412 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 IGFBP5P24593 272 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 NOS3P29474 1203 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 CD79BP40259 229 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 CLRN1P58418 232 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 ROR2Q01974 943 aaKnown RBP14.38□□□□□ -0.11
TMEM53-203ENST00000372242 KRR1Q13601 381 aaKnown RBP14.38□□□□□ -0.11
TMEM53-203ENST00000372242 LRRC36Q1X8D7 754 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 OR4Q3Q8NH05 313 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 TEX47Q8TBZ9 253 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 EME1Q96AY2 570 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 LRR1Q96L50 414 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 KCNK17Q96T54 332 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 SLC29A1Q99808 456 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 LINC00470Q9BZP3 86 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 CRLF2Q9HC73 371 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 OR6C65A6NJZ3 312 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 IMPA2O14732 288 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 CNOT4O95628 575 aaKnown RBP14.38□□□□□ -0.11
TMEM53-203ENST00000372242 ITGA5P08648 1049 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 FMODQ06828 376 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 CD47Q08722 323 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 DBPQ10586 325 aaPredicted RBP14.38□□□□□ -0.11
TMEM53-203ENST00000372242 TRIP10Q15642 601 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 LPCAT4Q643R3 524 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 GPR139Q6DWJ6 353 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 LRFN4Q6PJG9 635 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 PTCHD4Q6ZW05 846 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 HDDC2Q7Z4H3 204 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 NOXO1Q8NFA2 376 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 DNAJC9Q8WXX5 260 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 TMEM54Q969K7 222 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 RBM4BQ9BQ04 359 aaKnown RBP14.38□□□□□ -0.11
TMEM53-203ENST00000372242 C9orf16Q9BUW7 83 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 RBM4Q9BWF3 364 aaKnown RBP14.38□□□□□ -0.11
TMEM53-203ENST00000372242 ULBP2Q9BZM5 246 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 GPR35Q9HC97 309 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 ELOVL5Q9NYP7 299 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 GLTPQ9NZD2 209 aa14.38□□□□□ -0.11
TMEM53-203ENST00000372242 STX18Q9P2W9 335 aaKnown RBP14.38□□□□□ -0.11
TMEM53-203ENST00000372242 A6NIZ1 184 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 PRSS44E7EML9 344 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 ZNF587BE7ETH6 402 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 XKRYO14609 159 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 ARPC3O15145 178 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 TXNDC12O95881 172 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 ALPLP05186 524 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 QDPRP09417 244 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 APEHP13798 732 aaKnown RBP14.37□□□□□ -0.11
TMEM53-203ENST00000372242 HIST1H1CP16403 213 aaKnown RBP14.37□□□□□ -0.11
TMEM53-203ENST00000372242 EPHA2P29317 976 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 CCKARP32238 428 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 UGT2B10P36537 528 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 CDKN2AP42771 156 aaKnown RBP14.37□□□□□ -0.11
TMEM53-203ENST00000372242 RAP1BP61224 184 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 RAP1AP62834 184 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 ITGADQ13349 1161 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 DAG1Q14118 895 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 P2RY6Q15077 328 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 CEACAM16Q2WEN9 425 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms