RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 RFC3P40938 356 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 NAA10P41227 235 aaPredicted RBP23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 CAPZA2P47755 286 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 RAC3P60763 192 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 ACSM1Q08AH1 577 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 ZFP62Q8NB50 900 aaPredicted RBP23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 TXNDC15Q96J42 360 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 MYCBPQ99417 103 aaPredicted RBP23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 RERGLQ9H628 205 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 QPCTLQ9NXS2 382 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 B9D1Q9UPM9 204 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 NCKAP5O14513 1909 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 FREM3P0C091 2139 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 A0A1W2PQL4 384 aaPredicted RBP23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 AKAP8O43823 692 aaKnown RBP23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 AIREO43918 545 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 CEACAM4O75871 244 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 TFP02787 698 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 PCSK6P29122 969 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 AGFG1P52594 562 aaKnown RBP23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 RUNX1T1Q06455 604 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 GGNQ86UU5 652 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 TMEM251Q8N6I4 163 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 SPRYD4Q8WW59 207 aaPredicted RBP23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 MED12Q93074 2177 aa23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 MRPL48Q96GC5 212 aaKnown RBP23.52■■□□□ 1.36
ATPAF1-202ENST00000371937 FAM166BA8MTA8 275 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 ZNF814B7Z6K7 855 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 EIF1AYO14602 144 aaKnown RBP23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 SLC16A7O60669 478 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 CPEP16870 476 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 GADD45AP24522 165 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 CD79BP40259 229 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 SH3BGRP55822 239 aaPredicted RBP23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 BIDP55957 195 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 CLDN20P56880 219 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 SSX1Q16384 188 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 DNM1P34Q6PK57 102 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 ASB18Q6ZVZ8 466 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 SLC16A9Q7RTY1 509 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 SLC22A16Q86VW1 577 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 ZNF511Q8NB15 262 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 TM9SF4Q92544 642 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 KCNK17Q96T54 332 aa23.51■■□□□ 1.35
ATPAF1-202ENST00000371937 SELENOFO60613 162 aa23.5■■□□□ 1.35
ATPAF1-202ENST00000371937 MAGEA5P43359 124 aa23.5■■□□□ 1.35
ATPAF1-202ENST00000371937 CARD18P57730 90 aa23.5■■□□□ 1.35
ATPAF1-202ENST00000371937 ZNF85Q03923 595 aa23.5■■□□□ 1.35
ATPAF1-202ENST00000371937 TPBGQ13641 420 aa23.5■■□□□ 1.35
ATPAF1-202ENST00000371937 HBMQ6B0K9 141 aa23.5■■□□□ 1.35
ATPAF1-202ENST00000371937 ATCAYQ86WG3 371 aa23.5■■□□□ 1.35
ATPAF1-202ENST00000371937 MFRPQ9BY79 579 aa23.5■■□□□ 1.35
ATPAF1-202ENST00000371937 TSPAN10Q9H1Z9 355 aaPredicted RBP23.5■■□□□ 1.35
ATPAF1-202ENST00000371937 NDUFB11Q9NX14 153 aa23.5■■□□□ 1.35
ATPAF1-202ENST00000371937 WASF3Q9UPY6 502 aa23.5■■□□□ 1.35
ATPAF1-202ENST00000371937 A0A1W2PPW3 197 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 TLX3O43711 291 aaPredicted RBP23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 TRAF3IP2O43734 574 aaPredicted RBP23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 MT-ND5P03915 603 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 ACTA2P62736 377 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 PPIAP62937 165 aaKnown RBP23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 ACTG2P63267 376 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 BDH1Q02338 343 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 HSF2Q03933 536 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 NFATC3Q12968 1075 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 PDSS1Q5T2R2 415 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 LIPKQ5VXJ0 399 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 PHC2Q8IXK0 858 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 OR2V1Q8NHB1 315 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 SNIP1Q8TAD8 396 aaKnown RBP23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 SMAP2Q8WU79 429 aaPredicted RBP23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 UFD1Q92890 307 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 BABAM2Q9NXR7 383 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 ACOT7O00154 380 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 PSMA1P25786 263 aaKnown RBP23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 CD97P48960 835 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 TIGD4Q8IY51 512 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 SYT14Q8NB59 555 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 RPL3LQ92901 407 aaKnown RBP23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 SLC25A44Q96H78 314 aaPredicted RBP23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 MNTQ99583 582 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 TIMP4Q99727 224 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 ISG20L2Q9H9L3 353 aaKnown RBP23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 TIGARQ9NQ88 270 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 MSRB2Q9Y3D2 182 aa23.49■■□□□ 1.35
ATPAF1-202ENST00000371937 AKAP13Q12802 2813 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 ALPK2Q86TB3 2170 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 IGLV1-36A0A0B4J1U3 117 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 CENPBD1B2RD01 187 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 RAMP1O60894 148 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 CTLA4P16410 223 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 STARP49675 285 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 HCCSP53701 268 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 LSM3P62310 102 aaKnown RBP23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 AQP6Q13520 282 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 POU4F3Q15319 338 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 LYPD4Q6UWN0 246 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 UBQLNLQ8IYU4 475 aa23.48■■□□□ 1.35
ATPAF1-202ENST00000371937 OR6X1Q8NH79 312 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms