RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ABHD17BQ5VST6 288 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 SLC22A10Q63ZE4 541 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 KDM4DQ6B0I6 523 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 SPINK14Q6IE38 97 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 TMEM81Q6P7N7 255 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 ARSKQ6UWY0 536 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 RTL4Q6ZR62 310 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 ZER1Q7Z7L7 766 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 P3H2Q8IVL5 708 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 IQCF2Q8IXL9 164 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 TMCO5AQ8N6Q1 288 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 PACRGLQ8N7B6 248 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 FADS6Q8N9I5 356 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 CLEC1AQ8NC01 280 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 CATSPER1Q8NEC5 780 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 OR2M3Q8NG83 312 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 OR4K5Q8NGD3 323 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 MAGEE2Q8TD90 523 aaPredicted RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 NR4A3Q92570 626 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 ZNF503Q96F45 646 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 SECISBP2Q96T21 854 aaKnown RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 PSD2Q9BQI7 771 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 OSBPL11Q9BXB4 747 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 HDHD5Q9BXW7 423 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 HES7Q9BYE0 225 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 KRTAP9-8Q9BYQ0 159 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 POLR2J2Q9GZM3 115 aaKnown RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 POLR2J3Q9H1A7 115 aaKnown RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 DSN1Q9H410 356 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 PAPOLBQ9NRJ5 636 aaKnown RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 GPR83Q9NYM4 423 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 KLRF1Q9NZS2 232 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 TESQ9UGI8 421 aaKnown RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 FBXL2Q9UKC9 423 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 WIF1Q9Y5W5 379 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 CPAMD8Q8IZJ3 1885 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 DSPP15924 2871 aaKnown RBP3.19□□□□□ -1.9
MCF2-202ENST00000370573 ZZEF1O43149 2961 aa3.19□□□□□ -1.9
MCF2-202ENST00000370573 LAMA5O15230 3695 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 MED12Q93074 2177 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ANKUB1A6NFN9 424 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 NPIPB13A6NJU9 1138 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 NPIPB5A8MRT5 1133 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 C17orf100A8MU93 164 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 NPIPB4C9JG80 1138 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 E9PQ18 207 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 H0YJX3 145 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 TAF4O00268 1085 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 TRIM3O75382 744 aaPredicted RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 CEACAM4O75871 244 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 SEC14L2O76054 403 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 HPRP00739 348 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ANXA8P13928 327 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 POU2F1P14859 743 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 GABRB1P18505 474 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 MAKP20794 623 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 CPT2P23786 658 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 EPHA2P29317 976 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 TACR3P29371 465 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 SLC1A3P43003 542 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 OMPP47874 163 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 SLC6A8P48029 635 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 DNASE1L1P49184 302 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 CYB561P49447 251 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 CLK3P49761 638 aaKnown RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 DLX5P56178 289 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 TIRAPP58753 221 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ADARB1P78563 741 aaKnown RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 EFNB1P98172 346 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 PIGFQ07326 219 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 MFAP5Q13361 173 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 SNTA1Q13424 505 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 GK3PQ14409 553 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 CD300EQ496F6 205 aaPredicted RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 AGAP7PQ5VUJ5 663 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 C1QL3Q5VWW1 255 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 WBP2NLQ6ICG8 309 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 C1orf94Q6P1W5 598 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ULK3Q6PHR2 472 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ISLR2Q6UXK2 745 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ZNF730Q6ZMV8 503 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 MBOAT2Q6ZWT7 520 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ADGRG3Q86Y34 549 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 MISPQ8IVT2 679 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 NRMQ8IXM6 262 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 DND1Q8IYX4 353 aaKnown RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 CYP4Z2PQ8N1L4 340 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 AQP11Q8NBQ7 271 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 MDS2Q8NDY4 140 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 FDCSPQ8NFU4 85 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 PFN4Q8NHR9 129 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ACOT11Q8WXI4 607 aaPredicted RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 DNAJC9Q8WXX5 260 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 PTP4A1Q93096 173 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 SLC38A4Q969I6 547 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 AGAP4Q96P64 663 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 TSC22D3Q99576 134 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ZNF184Q99676 751 aaPredicted RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 RBM4BQ9BQ04 359 aaKnown RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 UTP23Q9BRU9 249 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms