RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 SCAMP1O15126 338 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 SPI1P17947 270 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 CASRP41180 1078 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 NKPD1Q17RQ9 610 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF600Q6ZNG1 722 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 OR5M8Q8NGP6 311 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 ZCCHC10Q8TBK6 192 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 ZMAT3Q9HA38 289 aaKnown RBP13.12□□□□□ -0.31
PHTF1-204ENST00000369604 APOBEC3BQ9UH17 382 aaKnown RBP13.12□□□□□ -0.31
PHTF1-204ENST00000369604 KCNE5Q9UJ90 142 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 LYPD3O95274 346 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 DCNP07585 359 aaKnown RBP13.12□□□□□ -0.31
PHTF1-204ENST00000369604 ERGP11308 486 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 DDX6P26196 483 aaKnown RBP eCLIP13.12□□□□□ -0.31
PHTF1-204ENST00000369604 CD96P40200 585 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 SKP1P63208 163 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 DHRS2Q13268 280 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 ANKRD16Q6P6B7 361 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 OR4K14Q8NGD5 310 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 STOML3Q8TAV4 291 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 TSEN15Q8WW01 171 aaKnown RBP13.12□□□□□ -0.31
PHTF1-204ENST00000369604 ASB13Q8WXK3 278 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 TSSK2Q96PF2 358 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 MYADMQ96S97 322 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 FAM96BQ9Y3D0 163 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 NUP210Q8TEM1 1887 aaPredicted RBP13.12□□□□□ -0.31
PHTF1-204ENST00000369604 DENND4CQ5VZ89 1909 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 CXorf51AA0A1B0GTR3 108 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 C13orf42A0A1B0GVH6 325 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 RNF222A6NCQ9 220 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 ELOA3DA6NLF2 546 aaPredicted RBP13.12□□□□□ -0.31
PHTF1-204ENST00000369604 PRR32B1ATL7 298 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 RAD1O60671 282 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
PHTF1-204ENST00000369604 ELOA3BQ3SY89 546 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 NKAIN2Q5VXU1 208 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 ELOA3Q8NG57 546 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 OR10AC1Q8NH08 325 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 TMED6Q8WW62 240 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 FGF13Q92913 245 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 FBXO17Q96EF6 278 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 HRH4Q9H3N8 390 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 SFXN1Q9H9B4 322 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 DHCR7Q9UBM7 475 aaKnown RBP13.12□□□□□ -0.31
PHTF1-204ENST00000369604 CHRNA9Q9UGM1 479 aa13.12□□□□□ -0.31
PHTF1-204ENST00000369604 MEX3AA1L020 520 aaKnown RBP13.11□□□□□ -0.31
PHTF1-204ENST00000369604 CD1AP06126 327 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 NGFRP08138 427 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 GABRA3P34903 492 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 RAB28P51157 221 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 ACTBP60709 375 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 ACTG1P63261 375 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 ALKBH1Q13686 389 aaKnown RBP13.11□□□□□ -0.31
PHTF1-204ENST00000369604 ZIC1Q15915 447 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 METRNLQ641Q3 311 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 FAM109BQ6ICB4 259 aaPredicted RBP13.11□□□□□ -0.31
PHTF1-204ENST00000369604 C3orf33Q6P1S2 294 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 RHOUQ7L0Q8 258 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 RNF44Q7L0R7 432 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF251Q9BRH9 671 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 ICAM5Q9UMF0 924 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 KCNK6Q9Y257 313 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 GON4LQ3T8J9 2241 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 TRBV23-1A0A0A0MS06 115 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 A0A0B4J2A0 478 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 C5orf51A6NDU8 294 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 C1orf196B1AJZ1 125 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 TXNL1O43396 289 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 PQBP1O60828 265 aaKnown RBP13.11□□□□□ -0.31
PHTF1-204ENST00000369604 PRNPP04156 253 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF28P17035 718 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 VAMP1P23763 118 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 TAS2R19P59542 299 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF345Q14585 488 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 TCEA2Q15560 299 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 LEG1Q6P5S2 330 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 C10orf53Q8N6V4 93 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 ARRDC3Q96B67 414 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 INSM2Q96T92 566 aaPredicted RBP13.11□□□□□ -0.31
PHTF1-204ENST00000369604 ALG12Q9BV10 488 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 ZNF350Q9GZX5 532 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 COMMD4Q9H0A8 199 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 SRA1Q9HD15 236 aaKnown RBP13.11□□□□□ -0.31
PHTF1-204ENST00000369604 SHPKQ9UHJ6 478 aa13.11□□□□□ -0.31
PHTF1-204ENST00000369604 CCL16O15467 120 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 OR2T1O43869 369 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 CDC40O60508 579 aaKnown RBP eCLIP13.1□□□□□ -0.31
PHTF1-204ENST00000369604 CYB5AP00167 134 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 PBX2P40425 430 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 HAAOP46952 286 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 NAA40Q86UY6 237 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 CD163Q86VB7 1156 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 GALNT16Q8N428 558 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 MENTQ9BUN1 341 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 FLRT3Q9NZU0 649 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 SERTAD3Q9UJW9 196 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 TVP23AA6NH52 213 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 OR52A4PA6NMU1 304 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 SPINT1O43278 529 aa13.1□□□□□ -0.31
PHTF1-204ENST00000369604 ITGB2P05107 769 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms