RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 FOXK1P85037 733 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 TNFRSF17Q02223 184 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 NHLH2Q02577 135 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 PPP1R8Q12972 351 aaKnown RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 TGIF1Q15583 401 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 LRIF1Q5T3J3 769 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 ANXA8L1Q5VT79 327 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 OVCH1Q7RTY7 1134 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 TAF8Q7Z7C8 310 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 PROKR2Q8NFJ6 384 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 OR9Q2Q8NGE9 314 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 OR9A1PQ8NGU1 263 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF385AQ96PM9 386 aaKnown RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 PANX1Q96RD7 426 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 SPRTNQ9H040 489 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 ASIC5Q9NY37 505 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 A0A0A6YYD5 115 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 A0A0G2JN53 185 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 A0A1B0GUH1 482 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 E7EQ34 232 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 H0YIG0 161 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 ITGB1BP1O14713 200 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 SERPINA3P01011 423 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 TCRBP04435 133 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 UBBP0CG47 229 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 UBCP0CG48 685 aaKnown RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 HKR1P10072 659 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 BCKDHAP12694 445 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 RPA2P15927 270 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 PNLIPRP1P54315 467 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 SNRPGP62308 76 aaKnown RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 RPS27AP62979 156 aaKnown RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 UBA52P62987 128 aaKnown RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 DOC2AQ14183 400 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 LAPTM4AQ15012 233 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 P2RY14Q15391 338 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 TMEM95Q3KNT9 176 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 C9orf152Q5JTZ5 239 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 SLC25A30Q5SVS4 291 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 BAIAP2L2Q6UXY1 529 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 MSRB3Q8IXL7 192 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 TMEM52Q8NDY8 209 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 B3GNT7Q8NFL0 401 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 OR56B4Q8NH76 319 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 UBE2FQ969M7 185 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 CCNL2Q96S94 520 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 RAB11FIP5Q9BXF6 653 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 CYSLTR2Q9NS75 346 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 SNTG1Q9NSN8 517 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 GPR83Q9NYM4 423 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 HS3ST3B1Q9Y662 390 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 C5orf58C9J3I9 102 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 PIP5K1CO60331 668 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 ANXA4P09525 319 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 TFPIP10646 304 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 IGFBP2P18065 325 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 IDSP22304 550 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 GIFP27352 417 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 PSMB5P28074 263 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 DDTP30046 118 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 GANABQ14697 944 aaKnown RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 EXOC3L2Q2M3D2 409 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 TMUB2Q71RG4 321 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 LRRC70Q7Z2Q7 622 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF761Q86XN6 746 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 SERPINA12Q8IW75 414 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 LGI4Q8N135 537 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 FAM98AQ8NCA5 519 aaKnown RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 APCDD1LQ8NCL9 501 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 LCN9Q8WX39 176 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 APIPQ96GX9 242 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 SENP5Q96HI0 755 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 SLC38A1Q9H2H9 487 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 ACTL8Q9H568 366 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 CACYBPQ9HB71 228 aaKnown RBP6.23□□□□□ -1.41
CSDE1-204ENST00000369530 ACKR4Q9NPB9 350 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 NUDT15Q9NV35 164 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 MGAT4CQ9UBM8 478 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 MAP4K5Q9Y4K4 846 aa6.23□□□□□ -1.41
CSDE1-204ENST00000369530 ANKRD61A6NGH8 418 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 H0YIV9 168 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 RTCAO00442 366 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 FGF16O43320 207 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 GSTZ1O43708 216 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 SEMA7AO75326 666 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 CNR1P21554 472 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 RBMS1P29558 406 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 AQP1P29972 269 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 OPRM1P35372 400 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 KIR3DL1P43629 444 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 SELENOPP49908 381 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 GAS1P54826 345 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 VSX2P58304 361 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 SEC61A1P61619 476 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 HNRNPA0Q13151 305 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 DYRK1AQ13627 763 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 TPBGQ13641 420 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 SLBPQ14493 270 aaKnown RBP eCLIP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 RBMS2Q15434 407 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 GXYLT1Q4G148 440 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms