RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 HTR1FP30939 366 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 MTNR1AP48039 350 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 CCL11P51671 97 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 RAB40BQ12829 278 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 KLHL22Q53GT1 634 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 EMC4Q5J8M3 183 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 RNLSQ5VYX0 342 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 CREB3L2Q70SY1 520 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 SPATC1Q76KD6 591 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 FAM122BQ7Z309 247 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 CPOQ8IVL8 374 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 OR6F1Q8NGZ6 308 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 MOSPD2Q8NHP6 518 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 C9orf43Q8TAL5 461 aaPredicted RBP10.86□□□□□ -0.67
USF1-203ENST00000368021 FAR1Q8WVX9 515 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 FCGR1BQ92637 280 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 MUL1Q969V5 352 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 TMEM80Q96HE8 168 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 KATNB1Q9BVA0 655 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 TAPBPLQ9BX59 468 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 ASPNQ9BXN1 380 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 RNF32Q9H0A6 362 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 ACOT13Q9NPJ3 140 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 H2AFY2Q9P0M6 372 aaPredicted RBP10.86□□□□□ -0.67
USF1-203ENST00000368021 MRPS18CQ9Y3D5 142 aaKnown RBP10.86□□□□□ -0.67
USF1-203ENST00000368021 IER3IP1Q9Y5U9 82 aa10.86□□□□□ -0.67
USF1-203ENST00000368021 PRR23D1E9PI22 279 aaPredicted RBP10.85□□□□□ -0.67
USF1-203ENST00000368021 G3V3Y1 287 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 ZIC3O60481 467 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 PRR23D2P0DMB1 279 aaPredicted RBP10.85□□□□□ -0.67
USF1-203ENST00000368021 HIST1H1CP16403 213 aaKnown RBP10.85□□□□□ -0.67
USF1-203ENST00000368021 GRPRP30550 384 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 SRD5A2P31213 254 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 DNASE1L1P49184 302 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 CDH11P55287 796 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 IRF3Q14653 427 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 GXYLT1Q4G148 440 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 ARMC4Q5T2S8 1044 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 FAM205BPQ63HN1 556 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 SLC6A19Q695T7 634 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 SPINK14Q6IE38 97 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 PLBD1Q6P4A8 553 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 EXD3Q8N9H8 876 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 LRRC20Q8TCA0 184 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 RORBQ92753 470 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 PTP4A1Q93096 173 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 SLC25A36Q96CQ1 311 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 ARL5BQ96KC2 179 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 JSRP1Q96MG2 331 aaPredicted RBP10.85□□□□□ -0.67
USF1-203ENST00000368021 TAS2R5Q9NYW4 299 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 DKKL1Q9UK85 242 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 ADAM18Q9Y3Q7 739 aa10.85□□□□□ -0.67
USF1-203ENST00000368021 TLN1Q9Y490 2541 aaKnown RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 A0A0G2JMM0 328 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 A0A1W2PPB8 328 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 A0A1W2PRS3 328 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 LRRC3CA6NJW4 275 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 LIPT2A6NK58 231 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 KIR3DP1A8MWS1 328 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 SHISA8B8ZZ34 492 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 PLPP3O14495 311 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 FADS2O95864 444 aaKnown RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 PRB1P04280 392 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 IL11P20809 199 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 NR4A1P22736 598 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 SDHAP31040 664 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 UGT2B10P36537 528 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 NR4A2P43354 598 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 CTXN1P60606 82 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 CRMP1Q14194 572 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 OR1C1Q15619 314 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 SYT6Q5T7P8 510 aaPredicted RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 UBE2UQ5VVX9 321 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 GPR139Q6DWJ6 353 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 NIPAL3Q6P499 406 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 LYSMD2Q8IV50 215 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 SLC37A3Q8NCC5 494 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 ENKURQ8TC29 256 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 FAM173AQ9BQD7 235 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 PIGQQ9BRB3 760 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 CCDC32Q9BV29 185 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 SLC6A15Q9H2J7 730 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 FGF20Q9NP95 211 aaPredicted RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 ZFP64Q9NPA5 681 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 FANCFQ9NPI8 374 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 ZNF71Q9NQZ8 489 aaPredicted RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 DEPPQ9NTK1 212 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 ALKBH4Q9NXW9 302 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 CCDC59Q9P031 241 aaKnown RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 BOKQ9UMX3 212 aaPredicted RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 DIMT1Q9UNQ2 313 aaKnown RBP10.84□□□□□ -0.67
USF1-203ENST00000368021 HDGFL3Q9Y3E1 203 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 ZNF175Q9Y473 711 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 SPTA1P02549 2419 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 OR5H15A6NDH6 313 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 HMX3A6NHT5 357 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 SLC22A31A6NKX4 558 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 FAM183AA6NL82 134 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 LOC110117498-PIK3R3F6TDL0 507 aa10.84□□□□□ -0.67
USF1-203ENST00000368021 H3BML4 177 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms