RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 JAM3Q9BX67 310 aa8.47□□□□□ -1.05
VTA1-201ENST00000367621 CCDC90BQ9GZT6 254 aa8.47□□□□□ -1.05
VTA1-201ENST00000367621 OR51V1Q9H2C8 321 aa8.47□□□□□ -1.05
VTA1-201ENST00000367621 GRHPRQ9UBQ7 328 aa8.47□□□□□ -1.05
VTA1-201ENST00000367621 B4GALT7Q9UBV7 327 aa8.47□□□□□ -1.05
VTA1-201ENST00000367621 WARS2Q9UGM6 360 aaKnown RBP8.47□□□□□ -1.05
VTA1-201ENST00000367621 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.47□□□□□ -1.05
VTA1-201ENST00000367621 RAXQ9Y2V3 346 aa8.47□□□□□ -1.05
VTA1-201ENST00000367621 SNX5Q9Y5X3 404 aa8.47□□□□□ -1.05
VTA1-201ENST00000367621 CEPT1Q9Y6K0 416 aa8.47□□□□□ -1.05
VTA1-201ENST00000367621 COMMD3-BMI1R4GMX3 469 aa8.47□□□□□ -1.05
VTA1-201ENST00000367621 LAMA5O15230 3695 aa8.47□□□□□ -1.05
VTA1-201ENST00000367621 NCOR2Q9Y618 2525 aa8.46□□□□□ -1.05
VTA1-201ENST00000367621 IGLV1-36A0A0B4J1U3 117 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 IGHV3-15A0A0B4J1V0 119 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 A0A1W2PRG6 482 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 SLC22A23A1A5C7 686 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 PRSS37A4D1T9 235 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 SLC22A31A6NKX4 558 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 GJE1A6NN92 205 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 H3BSA7 217 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 EIF1AYO14602 144 aaKnown RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 SMAD9O15198 467 aaKnown RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 ARHGEF9O43307 516 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 DNPH1O43598 174 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 CXCL13O43927 109 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 EIF1BO60739 113 aaKnown RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 SERPINI2O75830 405 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 OR6A2O95222 327 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 TFP02787 698 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 LIMS3P0CW19 117 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 LIMS4P0CW20 117 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 ZNF708P17019 499 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 POU3F2P20265 443 aaPredicted RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 DCKP27707 260 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 RAC3P60763 192 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 POU3F1Q03052 451 aaPredicted RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 MELKQ14680 651 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 SLC10A1Q14973 349 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 POU4F3Q15319 338 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 BCL2A1Q16548 175 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 KLHL12Q53G59 568 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 SYT6Q5T7P8 510 aaPredicted RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 EEF1A1P5Q5VTE0 462 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 Q6ZS92 163 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 ESPNLQ6ZVH7 1005 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 ADCK1Q86TW2 530 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 ZBTB46Q86UZ6 589 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 SLC22A16Q86VW1 577 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 JAZF1Q86VZ6 243 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 SIAH3Q8IW03 269 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 PM20D2Q8IYS1 436 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 FAM109AQ8N4B1 249 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 NANOGP1Q8N7R0 232 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 RBMXL3Q8N7X1 1067 aaKnown RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 OR51L1Q8NGJ5 315 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 OR10D3Q8NH80 312 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 SMAP2Q8WU79 429 aaPredicted RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 SNRNP27Q8WVK2 155 aaKnown RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 SMPDL3BQ92485 455 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 OTULINQ96BN8 352 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 ABHD17AQ96GS6 310 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 OR5M11Q96RB7 305 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 TAAR6Q96RI8 345 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 TUBA1CQ9BQE3 449 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 MRPL13Q9BYD1 178 aaKnown RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 NDEL1Q9GZM8 345 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 ADGRL4Q9HBW9 690 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 RPRD1BQ9NQG5 326 aaKnown RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 MED29Q9NX70 200 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 H2AFY2Q9P0M6 372 aaPredicted RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 ING1Q9UK53 422 aaPredicted RBP8.46□□□□□ -1.06
VTA1-201ENST00000367621 RASD1Q9Y272 281 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 NOX1Q9Y5S8 564 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 CFAP47Q6ZTR5 3102 aa8.46□□□□□ -1.06
VTA1-201ENST00000367621 IGKV1D-43A0A0B4J1Z2 117 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 SMIM31A0A1B0GVY4 71 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 SNTNA6NMZ2 147 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 ZNF716A6NP11 495 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 FAM171A2A8MVW0 826 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 ZNF99A8MXY4 864 aaPredicted RBP8.45□□□□□ -1.06
VTA1-201ENST00000367621 SEC14L5O43304 696 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 TRMUO75648 421 aaKnown RBP8.45□□□□□ -1.06
VTA1-201ENST00000367621 GLCEO94923 617 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 RAB36O95755 333 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 BCL10O95999 233 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 IGHG3P01860 377 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 SBK2P0C263 348 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 CTLA4P16410 223 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 PAICSP22234 425 aaKnown RBP8.45□□□□□ -1.06
VTA1-201ENST00000367621 GTF2E2P29084 291 aaKnown RBP8.45□□□□□ -1.06
VTA1-201ENST00000367621 PYCR1P32322 319 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 NTF4P34130 210 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 PTGS2P35354 604 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 PLA2G5P39877 138 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 CD79BP40259 229 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 CARD18P57730 90 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 CSNK2A1P68400 391 aaPredicted RBP8.45□□□□□ -1.06
VTA1-201ENST00000367621 SLC17A1Q14916 467 aa8.45□□□□□ -1.06
VTA1-201ENST00000367621 SLC35D3Q5M8T2 416 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms