RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 KHDRBS3O75525 346 aaKnown RBP13.4□□□□□ -0.26
PRKN-204ENST00000366896 SP9P0CG40 484 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 HIST1H1CP16403 213 aaKnown RBP13.4□□□□□ -0.26
PRKN-204ENST00000366896 B2MP61769 119 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 EIF2B5Q13144 721 aaKnown RBP13.4□□□□□ -0.26
PRKN-204ENST00000366896 FAM53BQ14153 422 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 ZNF141Q15928 474 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 GSG1LQ6UXU4 331 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 SFTPA2Q8IWL1 248 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 SLC35F2Q8IXU6 374 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 CLRN3Q8NCR9 226 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 OR4N2Q8NGD1 307 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 OR52R1Q8NGF1 315 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 OR5M9Q8NGP3 310 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 FCAMRQ8WWV6 532 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 ORAI1Q96D31 301 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 MRPS24Q96EL2 167 aaKnown RBP13.4□□□□□ -0.26
PRKN-204ENST00000366896 OR14A2Q96R54 314 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 ARL6Q9H0F7 186 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 EXOSC3Q9NQT5 275 aaKnown RBP13.4□□□□□ -0.26
PRKN-204ENST00000366896 OPN4Q9UHM6 478 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 COPS3Q9UNS2 423 aa13.4□□□□□ -0.26
PRKN-204ENST00000366896 SULT1B1O43704 296 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 NDUFB6O95139 128 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 IGKV1D-16P01601 117 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 GPR143P51810 404 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 PON3Q15166 354 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 STK11Q15831 433 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 LYSMD4Q5XG99 296 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 DPY19L2P2Q6ZN68 376 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 ANKRD9Q96BM1 317 aaPredicted RBP13.39□□□□□ -0.27
PRKN-204ENST00000366896 CCNL2Q96S94 520 aaPredicted RBP13.39□□□□□ -0.27
PRKN-204ENST00000366896 ANKRD10Q9NXR5 420 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 MED11Q9P086 117 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 NPIPB9F8W1W9 429 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 ABCD4O14678 606 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 SDC3O75056 442 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 IGF2P01344 180 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 DHPSP49366 369 aaPredicted RBP13.39□□□□□ -0.27
PRKN-204ENST00000366896 PSMD4P55036 377 aaKnown RBP13.39□□□□□ -0.27
PRKN-204ENST00000366896 RAB38P57729 211 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 PSG6Q00889 435 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 GXYLT1Q4G148 440 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 C17orf107Q6ZR85 190 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 CDH26Q8IXH8 852 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 PDCD1LG2Q9BQ51 273 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 NMNAT2Q9BZQ4 307 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 MKKSQ9NPJ1 570 aaPredicted RBP13.39□□□□□ -0.27
PRKN-204ENST00000366896 ADAM18Q9Y3Q7 739 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 SPAG17Q6Q759 2223 aa13.39□□□□□ -0.27
PRKN-204ENST00000366896 EFCAB7A8K855 629 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 C2orf74A8MZ97 194 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 MCIDASD6RGH6 385 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 BCAT2O15382 392 aaPredicted RBP13.38□□□□□ -0.27
PRKN-204ENST00000366896 HCRTR1O43613 425 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 AQP8O94778 261 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 HPP00738 406 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 APOC3P02656 99 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 DPP4P27487 766 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 PSMB10P40306 273 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 PTH2RP49190 550 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 DLX5P56178 289 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 MRPS10P82664 201 aaKnown RBP13.38□□□□□ -0.27
PRKN-204ENST00000366896 FLI1Q01543 452 aaPredicted RBP13.38□□□□□ -0.27
PRKN-204ENST00000366896 NDUFAF6Q330K2 333 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 CLVS2Q5SYC1 327 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 ZNF660Q6AZW8 331 aaPredicted RBP13.38□□□□□ -0.27
PRKN-204ENST00000366896 SNX33Q8WV41 574 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 OR1F2PQ96R84 312 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 GPX7Q96SL4 187 aaPredicted RBP13.38□□□□□ -0.27
PRKN-204ENST00000366896 SLC38A3Q99624 504 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 GFI1Q99684 422 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 NCDNQ9UBB6 729 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 GNG8Q9UK08 70 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 IER3IP1Q9Y5U9 82 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 TRBV2A0A0J9YWF9 115 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 CTSBP07858 339 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 S1PR1P21453 382 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 MNDAP41218 407 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 PPP1CAP62136 330 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 MAT1AQ00266 395 aaKnown RBP13.38□□□□□ -0.27
PRKN-204ENST00000366896 ZNHIT3Q15649 155 aaPredicted RBP13.38□□□□□ -0.27
PRKN-204ENST00000366896 ZNF542PQ5EBM4 170 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 HES5Q5TA89 166 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 FAAP20Q6NZ36 180 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 KIRREL2Q6UWL6 708 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 PARGQ86W56 976 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 ZPLD1Q8TCW7 415 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 ATOH1Q92858 354 aaPredicted RBP13.38□□□□□ -0.27
PRKN-204ENST00000366896 ZC3H10Q96K80 434 aaKnown RBP13.38□□□□□ -0.27
PRKN-204ENST00000366896 SLC19A3Q9BZV2 496 aa13.38□□□□□ -0.27
PRKN-204ENST00000366896 TCEAL2Q9H3H9 227 aaPredicted RBP13.38□□□□□ -0.27
PRKN-204ENST00000366896 IFITM5A6NNB3 132 aa13.37□□□□□ -0.27
PRKN-204ENST00000366896 MPTX1A8MV57 137 aa13.37□□□□□ -0.27
PRKN-204ENST00000366896 HRKO00198 91 aa13.37□□□□□ -0.27
PRKN-204ENST00000366896 TNFP01375 233 aa13.37□□□□□ -0.27
PRKN-204ENST00000366896 SRMP19623 302 aa13.37□□□□□ -0.27
PRKN-204ENST00000366896 H2BFSP57053 126 aa13.37□□□□□ -0.27
PRKN-204ENST00000366896 MCATQ8IVS2 390 aaKnown RBP13.37□□□□□ -0.27
PRKN-204ENST00000366896 NPEPL1Q8NDH3 523 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms