RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PRSS53Q2L4Q9 553 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 MAMSTRQ6ZN01 415 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 DPY19L2P2Q6ZN68 376 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 MED25Q71SY5 747 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 OVCH1Q7RTY7 1134 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 OR1E3Q8WZA6 343 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 FAM3CQ92520 227 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 YIPF5Q969M3 257 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 PGAM5Q96HS1 289 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 TPSD1Q9BZJ3 242 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 DUSP22Q9NRW4 184 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 SLC22A13Q9Y226 551 aa12.75□□□□□ -0.37
COL6A1-201ENST00000361866 TRIM64BA6NI03 449 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 PHYHO14832 338 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 SGCEO43556 437 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 GLCEO94923 617 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 CBR1P16152 277 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 SFTPDP35247 375 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 MMP15P51511 669 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 OR7A5Q15622 319 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 CLLU1Q5K131 121 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 TMEM91Q6ZNR0 172 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 PRSS42Q7Z5A4 293 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 TSEN54Q7Z6J9 526 aaKnown RBP12.74□□□□□ -0.37
COL6A1-201ENST00000361866 OR2AK2Q8NG84 335 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 KCNIP3Q9Y2W7 256 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 RPS27AP62979 156 aaKnown RBP12.74□□□□□ -0.37
COL6A1-201ENST00000361866 UBA52P62987 128 aaKnown RBP12.74□□□□□ -0.37
COL6A1-201ENST00000361866 DPTQ07507 201 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 PRAMEF8Q5VWM4 474 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 PRAMEF7Q5VXH5 474 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 OR4C16Q8NGL9 310 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 RLN3Q8WXF3 142 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 DAZLQ92904 295 aaKnown RBP12.74□□□□□ -0.37
COL6A1-201ENST00000361866 RADILQ96JH8 1075 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 C19orf43Q9BQ61 176 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 MS4A7Q9GZW8 240 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-201ENST00000361866 MCCC2Q9HCC0 563 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 SIRT4Q9Y6E7 314 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-201ENST00000361866 TMEM212A6NML5 194 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 F5H5K5 113 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF264O43296 627 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 NME2P22392 152 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 PXNP49023 591 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-201ENST00000361866 CAMLGP49069 296 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 DIO1P49895 249 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 STAC2Q6ZMT1 411 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 CDC6Q99741 560 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-201ENST00000361866 STEAP1Q9UHE8 339 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 SIGLEC7Q9Y286 467 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 B3GALT1Q9Y5Z6 326 aa12.74□□□□□ -0.37
COL6A1-201ENST00000361866 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 A0A0D9SG52 128 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 TSPAN11A1L157 253 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 D6RAR5 112 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 TNFSF12O43508 249 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 KCNJ13O60928 360 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 P2RX1P51575 399 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF41P51814 821 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-201ENST00000361866 CLDN6P56747 220 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 BDH1Q02338 343 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 POU3F1Q03052 451 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-201ENST00000361866 UBXN2BQ14CS0 331 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 Q5BKY6 102 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 KIRREL2Q6UWL6 708 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 MARCH3Q86UD3 253 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 ESX1Q8N693 406 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 SLC41A2Q96JW4 573 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 SPACA5Q96QH8 159 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF649Q9BS31 505 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 LMF2Q9BU23 707 aaKnown RBP12.73□□□□□ -0.37
COL6A1-201ENST00000361866 CCDC86Q9H6F5 360 aaKnown RBP12.73□□□□□ -0.37
COL6A1-201ENST00000361866 BIN3Q9NQY0 253 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF346Q9UL40 294 aaKnown RBP12.73□□□□□ -0.37
COL6A1-201ENST00000361866 LSM2Q9Y333 95 aaKnown RBP12.73□□□□□ -0.37
COL6A1-201ENST00000361866 NEUROG3Q9Y4Z2 214 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 C2orf72A6NCS6 295 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 H7C417 338 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 APOC1P02654 83 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 OR8U9P0C7N5 309 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 SLC2A1P11166 492 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 TMEM52BQ4KMG9 183 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 CCDC163A0A0D9SF12 145 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 ZFPL1O95159 310 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 GLI4P10075 376 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 PI3P19957 117 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 S100GP29377 79 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 MFSD13AQ14CX5 517 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 LGALSLQ3ZCW2 172 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF770Q6IQ21 691 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-201ENST00000361866 H3F3CQ6NXT2 135 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 SFTPA1Q8IWL2 248 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 TSTD1Q8NFU3 115 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 TMED6Q8WW62 240 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 OR10A5Q9H207 317 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 WDR76Q9H967 626 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 SERTM1A2A2V5 107 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 GGT3PA6NGU5 568 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms