RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 TRAV1-2A0A0B4J238 106 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 I3L1I5 382 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 NDUFB2O95178 105 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 YES1P07947 543 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 OR2T7P0C7T2 308 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 PITPNBP48739 271 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 HCCSP53701 268 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 ATP12AP54707 1039 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 SLC25A35Q3KQZ1 300 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 ACSM3Q53FZ2 586 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 CCDC92Q53HC0 331 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 CEP78Q5JTW2 689 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 KIAA0895LQ68EN5 471 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 IL20RBQ6UXL0 311 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF595Q8IYB9 648 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 SYS1Q8N2H4 156 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF614Q8N883 585 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 ASCC1Q8N9N2 400 aaKnown RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 AVL9Q8NBF6 648 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 C7orf57Q8NEG2 295 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 OR2T27Q8NH04 317 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 NEIL1Q96FI4 390 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 ERMAPQ96PL5 475 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 MESP1Q9BRJ9 268 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 THAP7Q9BT49 309 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-202ENST00000360642 DKK4Q9UBT3 224 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 CLCA3PQ9Y6N3 262 aa6.63□□□□□ -1.35
CLCN3-202ENST00000360642 EFCAB7A8K855 629 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 MCIDASD6RGH6 385 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 SCO2O43819 266 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 SRPX2O60687 465 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 RNH1P13489 461 aaKnown RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 PYCR1P32322 319 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 ACVR1BP36896 505 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 GZMKP49863 264 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 RPS11P62280 158 aaKnown RBP eCLIP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 FUT7Q11130 342 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 GPR176Q14439 515 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 CDONQ4KMG0 1287 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 YIF1BQ5BJH7 314 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 Q5BKY6 102 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 RGS7BPQ6MZT1 257 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 PPP1R32Q7Z5V6 425 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 ARL14Q8N4G2 192 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 LRRC17Q8N6Y2 441 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 SAMD12Q8N8I0 201 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 POMGNT2Q8NAT1 580 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 OR4K13Q8NH42 304 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 ZNRF4Q8WWF5 429 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 CREB3L1Q96BA8 519 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 PELI1Q96FA3 418 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 ABHD1Q96SE0 405 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 WACQ9BTA9 647 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 TRAF4Q9BUZ4 470 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 PLSCR3Q9NRY6 295 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 PAQR5Q9NXK6 330 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 SPTBP11277 2137 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 MBD3L4A6NDZ8 208 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 MBD3L3A6NE82 208 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 SLC9B1P1A6NJY1 282 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 PRAMEF2O60811 474 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 PAHP00439 452 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 CLPSP04118 112 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 THEGLP0DJG4 465 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 AHCYP23526 432 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 BTCP35070 178 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 GPR143P51810 404 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 PSMD4P55036 377 aaKnown RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 RPS4XP62701 263 aaKnown RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 BTG2P78543 158 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 MRPS15P82914 257 aaKnown RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 STX4Q12846 297 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 C1orf61Q13536 156 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 CDK5R1Q15078 307 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 ISXQ2M1V0 245 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 DPY19L2P2Q6ZN68 376 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 GPR135Q8IZ08 494 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 CADM2Q8N3J6 435 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 BCORP1Q8N888 145 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 YIPF7Q8N8F6 280 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF615Q8N8J6 731 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 NPEPL1Q8NDH3 523 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 SDR9C7Q8NEX9 313 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 OR13C5Q8NGS8 318 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 OR4C3Q8NH37 302 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 OR14A16Q8NHC5 309 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 C16orf52Q8NHV5 167 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 TRMT10AQ8TBZ6 339 aaKnown RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 RFT1Q96AA3 541 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 SMIM19Q96E16 107 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 ZMYND19Q96E35 227 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 SGTBQ96EQ0 304 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF578Q96N58 590 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF285Q96NJ3 590 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 BEX2Q9BXY8 128 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 NMNAT2Q9BZQ4 307 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 HCN3Q9P1Z3 774 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 LRIT1Q9P2V4 623 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms