RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 PPIAL4CA0A0B4J2A2 164 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 PPIAL4DF5H284 164 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 MS4A18H0YCH9 400 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 SERPINE1P05121 402 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 PPIAL4FP0DN26 164 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 ETFAP13804 333 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 RPL14P50914 215 aaKnown RBP11.79□□□□□ -0.52
VPS29-201ENST00000360579 MVDP53602 400 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 AQP5P55064 265 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 NME5P56597 212 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 ABCE1P61221 599 aaKnown RBP11.79□□□□□ -0.52
VPS29-201ENST00000360579 UFM1P61960 85 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 MS4A18Q3C1V0 323 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 USP51Q70EK9 711 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 DPPA2Q7Z7J5 298 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 ZNF584Q8IVC4 421 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 SIGLECL1Q8N7X8 197 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 LSMEM1Q8N8F7 131 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 GLB1L3Q8NCI6 653 aaPredicted RBP11.79□□□□□ -0.52
VPS29-201ENST00000360579 SLC30A7Q8NEW0 376 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 ZNF519Q8TB69 540 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 POP5Q969H6 163 aaKnown RBP11.79□□□□□ -0.52
VPS29-201ENST00000360579 ELMOD3Q96FG2 381 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 SLC41A3Q96GZ6 507 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 TMEM19Q96HH6 336 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 TEX37Q96LM6 180 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 EPYCQ99645 322 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 GAL3ST1Q99999 423 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 ASPNQ9BXN1 380 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 SLITRK2Q9H156 845 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 SAP30LQ9HAJ7 183 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 KLHL14Q9P2G3 628 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 LGALS13Q9UHV8 139 aa11.79□□□□□ -0.52
VPS29-201ENST00000360579 VWFP04275 2813 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 ITM2AO43736 263 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 CLPTM1O96005 669 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 HPRP00739 348 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 PTHP01270 115 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 LCKP06239 509 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 FAM157BP0CG42 384 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 HLA-DOBP13765 273 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 DRD4P21917 467 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 ETV4P43268 484 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 CSNK1A1P48729 337 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 ATP4BP51164 291 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 HOXC5Q00444 222 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 SLC3A1Q07837 685 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 PUDPQ08623 228 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 RBBP4Q09028 425 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 OCLNQ16625 522 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 TUSC1Q2TAM9 212 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 ALG10BQ5I7T1 473 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 RPS26P11Q5JNZ5 115 aaPredicted RBP11.78□□□□□ -0.52
VPS29-201ENST00000360579 FAM91A1Q658Y4 838 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 PXKQ7Z7A4 578 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 CPEB3Q8NE35 698 aaKnown RBP11.78□□□□□ -0.52
VPS29-201ENST00000360579 ST7LQ8TDW4 575 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.78□□□□□ -0.52
VPS29-201ENST00000360579 SLC25A28Q96A46 364 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 LRRC58Q96CX6 371 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 NUF2Q9BZD4 464 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 BCL2L14Q9BZR8 327 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 CDH20Q9HBT6 801 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 AIG1Q9NVV5 245 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 MED29Q9NX70 200 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 SELENONQ9NZV5 590 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 NUP50Q9UKX7 468 aa11.78□□□□□ -0.52
VPS29-201ENST00000360579 IGKV1D-42A0A075B6H8 117 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 A0A1B0GWA3 101 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 DNAJC9-AS1A6NH13 148 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 FOXH1O75593 365 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 FARS2O95363 451 aaKnown RBP11.77□□□□□ -0.53
VPS29-201ENST00000360579 ANP32DO95626 131 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 SNAP29O95721 258 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 IL6P05231 212 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 RNASE1P07998 156 aaKnown RBP11.77□□□□□ -0.53
VPS29-201ENST00000360579 ZCCHC18P0CG32 403 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 OR8G3PP0DMU2 310 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 CBLP22681 906 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 BAMBIQ13145 260 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 PMS2P3Q13401 168 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 LAPTM4AQ15012 233 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 ARMCX4Q5H9R4 360 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 ULK3Q6PHR2 472 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 WDFY1Q8IWB7 410 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 SKA3Q8IX90 412 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 OR1J2Q8NGS2 313 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 SLC47A1Q96FL8 570 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 TXNDC15Q96J42 360 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 TSPAN32Q96QS1 320 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 LRMDAQ9H2I8 198 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 MEAF6Q9HAF1 191 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 TPT1P8Q9HAU6 139 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 BCL2L10Q9HD36 194 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 MRPL39Q9NYK5 338 aaKnown RBP11.77□□□□□ -0.53
VPS29-201ENST00000360579 PLEK2Q9NYT0 353 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 GPR45Q9Y5Y3 372 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 WNK2Q9Y3S1 2297 aa11.77□□□□□ -0.53
VPS29-201ENST00000360579 CLDN34H7C241 214 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 BIRC5O15392 142 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms