RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TATDN3Q17R31 274 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 LDLRAD1Q5T700 205 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 LRRTM3Q86VH5 581 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 RNF141Q8WVD5 230 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 CPNE4Q96A23 557 aaPredicted RBP8.96□□□□□ -0.97
CUX1-203ENST00000360264 SHARPINQ9H0F6 387 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 VAPAQ9P0L0 249 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 RNF150Q9ULK6 438 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 H0YIV9 168 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 LAP3P28838 519 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 SOHLH1Q5JUK2 328 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 NLRC3Q7RTR2 1065 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 ZNF845Q96IR2 970 aaPredicted RBP8.96□□□□□ -0.97
CUX1-203ENST00000360264 TRIB1Q96RU8 372 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 SLC25A21Q9BQT8 299 aaPredicted RBP8.96□□□□□ -0.97
CUX1-203ENST00000360264 RTL8AQ9BWD3 113 aa8.96□□□□□ -0.97
CUX1-203ENST00000360264 A0A1B0GX78 115 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 CLDN17P56750 224 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 MFAP5Q13361 173 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 ADAMTSL4Q6UY14 1074 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 TSEN54Q7Z6J9 526 aaKnown RBP8.96□□□□□ -0.98
CUX1-203ENST00000360264 CDC20BQ86Y33 519 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 A4GALTQ9NPC4 353 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 KIR2DS1A0A191URI9 304 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 FOLR1P15328 257 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 KIR2DS4P43632 304 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 KIR2DS1Q14954 304 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 H1FNTQ75WM6 255 aaPredicted RBP8.96□□□□□ -0.98
CUX1-203ENST00000360264 ZBED3Q96IU2 234 aaPredicted RBP8.96□□□□□ -0.98
CUX1-203ENST00000360264 GSTO2Q9H4Y5 243 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 DIMT1Q9UNQ2 313 aaKnown RBP8.96□□□□□ -0.98
CUX1-203ENST00000360264 ZNF705GA8MUZ8 300 aaPredicted RBP8.96□□□□□ -0.98
CUX1-203ENST00000360264 J3QR89 54 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 BPIFB3P59826 476 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 TMEM31Q5JXX7 168 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 PARS2Q7L3T8 475 aaKnown RBP8.96□□□□□ -0.98
CUX1-203ENST00000360264 LINC01599Q8WXQ3 324 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 SLC6A17Q9H1V8 727 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.96□□□□□ -0.983e-6■■□□□ 13.5
CUX1-203ENST00000360264 H3BQ06 376 aaPredicted RBP8.96□□□□□ -0.98
CUX1-203ENST00000360264 DEGS1O15121 323 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 EIF4E2O60573 245 aaKnown RBP8.96□□□□□ -0.98
CUX1-203ENST00000360264 VEGFBP49765 207 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 FCRLBQ6BAA4 426 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 ZNF439Q8NDP4 499 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 MBOAT4Q96T53 435 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 OR11A1Q9GZK7 315 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 USP3Q9Y6I4 520 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 GIPRP48546 466 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 TSPAN31Q12999 210 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 LRRC18Q8N456 261 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 HHIPL1Q96JK4 782 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 HOXB5P09067 269 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 GJA4P35212 333 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 FAM162BQ5T6X4 162 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 OR10J5Q8NHC4 309 aa8.96□□□□□ -0.98
CUX1-203ENST00000360264 F2RP25116 425 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 GJA5P36382 358 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 SLC9A3R2Q15599 337 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 FAM78AQ5JUQ0 283 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 FBXL4Q9UKA2 621 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 YTHDF2Q9Y5A9 579 aaKnown RBP8.95□□□□□ -0.98
CUX1-203ENST00000360264 CEPT1Q9Y6K0 416 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 MAGEB1P43366 347 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 MAP2K6P52564 334 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 FLI1Q01543 452 aaPredicted RBP8.95□□□□□ -0.98
CUX1-203ENST00000360264 TPBGQ13641 420 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 GRINAQ7Z429 371 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 GOT1L1Q8NHS2 421 aaPredicted RBP8.95□□□□□ -0.98
CUX1-203ENST00000360264 CALHM2Q9HA72 323 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 GLCEO94923 617 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 IL2RAP01589 272 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 SPP1P10451 314 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 GPX3P22352 226 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 EDDM3BP56851 147 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 LHFPL2Q6ZUX7 228 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 SMIM3Q9BZL3 60 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 ZNF225Q9UK10 706 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 OR6C76A6NM76 312 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 UBL3O95164 117 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 PIGLQ9Y2B2 252 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 AGPAT2O15120 278 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 DOK3Q7L591 496 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 TMED7-TICAM2A0A0A6YYA0 188 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 SNRNP70P08621 437 aaKnown RBP8.95□□□□□ -0.98
CUX1-203ENST00000360264 LSAMPQ13449 338 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 GLYR1Q49A26 553 aaPredicted RBP8.95□□□□□ -0.98
CUX1-203ENST00000360264 PHYHD1Q5SRE7 291 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 ZNF813Q6ZN06 617 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 FCRLAQ7L513 359 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 ZNF582Q96NG8 517 aaPredicted RBP8.95□□□□□ -0.98
CUX1-203ENST00000360264 SORT1Q99523 831 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 DLL4Q9NR61 685 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 TMED7Q9Y3B3 224 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 HSPB2A8KAH6 182 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 CACNG3O60359 315 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 FBXO24O75426 580 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 PMS2P2O95744 297 aa8.95□□□□□ -0.98
CUX1-203ENST00000360264 PITX1P78337 314 aaPredicted RBP8.95□□□□□ -0.98
CUX1-203ENST00000360264 TEKQ02763 1124 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 764.8 ms