RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 AGAP4Q96P64 663 aa16.49■□□□□ 0.23
PDLIM7-203ENST00000359895 KCNJ15Q99712 375 aa16.49■□□□□ 0.23
PDLIM7-203ENST00000359895 C11orf54Q9H0W9 315 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-203ENST00000359895 IKZF2Q9UKS7 526 aa16.49■□□□□ 0.23
PDLIM7-203ENST00000359895 WIF1Q9Y5W5 379 aa16.49■□□□□ 0.23
PDLIM7-203ENST00000359895 ARPC4-TTLL3A0A0A6YYG9 625 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 FAM47E-STBD1D6RA91 191 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 EIF4EP06730 217 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 PRKAR1AP10644 381 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 INPP1P49441 399 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 EIF2B2P49770 351 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 DAP3P51398 398 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 NANOS3P60323 173 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 PUDPQ08623 228 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 EXT1Q16394 746 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 SLC25A35Q3KQZ1 300 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 CEP78Q5JTW2 689 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 H1FNTQ75WM6 255 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 SPATC1Q76KD6 591 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 DTWD2Q8NBA8 298 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 OTOSQ8NHW6 89 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 PMEPA1Q969W9 287 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 RNF166Q96A37 237 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 SPACA9Q96E40 222 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 CMTM3Q96MX0 182 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 WDFY4Q6ZS81 3184 aa16.48■□□□□ 0.23
PDLIM7-203ENST00000359895 IGLV1-36A0A0B4J1U3 117 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 LINC00854A0A1B0GVQ3 168 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 SLC22A23A1A5C7 686 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 PSMD9O00233 223 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 TP53I11O14683 189 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 PLA2G10O15496 165 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 RPP14O95059 124 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 ZFPL1O95159 310 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 LDOC1O95751 146 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 HLA-DQA2P01906 255 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 ZNF883P0CG24 379 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 ZNF28P17035 718 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 SRMP19623 302 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 PTGDSP41222 190 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 PITPNBP48739 271 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 FOXF1Q12946 379 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 SF3A2Q15428 464 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 BTBD16Q32M84 506 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 ZNF544Q6NX49 715 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 DNM1P34Q6PK57 102 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 FAM198BQ6UWH4 519 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 ARSKQ6UWY0 536 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 BAIAP2L2Q6UXY1 529 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 DPY19L4Q7Z388 723 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 UBQLNLQ8IYU4 475 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 OR4M1Q8NGD0 313 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 ENKURQ8TC29 256 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 THEM6Q8WUY1 208 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 THRSPQ92748 146 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 ZC3HAV1LQ96H79 300 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 MAP6Q96JE9 813 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 NEDD4LQ96PU5 975 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 RASL10BQ96S79 203 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 COMMD4Q9H0A8 199 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 ZNF700Q9H0M5 742 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 AKIRIN1Q9H9L7 192 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 CHST11Q9NPF2 352 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 NOX4Q9NPH5 578 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 SERINC1Q9NRX5 453 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 RABL2AQ9UBK7 228 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 RABL2BQ9UNT1 228 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 VDAC3Q9Y277 283 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 B3GALT1Q9Y5Z6 326 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 ZNF318Q5VUA4 2279 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 A0A1W2PPK0 400 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 MS4A18H0YCH9 400 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 SLC16A7O60669 478 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 DKK1O94907 266 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 CASP3P42574 277 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 MAP2K3P46734 347 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 INSM1Q01101 510 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 RASGEF1BQ0VAM2 473 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 OR7A5Q15622 319 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 PLPPR5Q32ZL2 321 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 MS4A18Q3C1V0 323 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 Q499Y3 187 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 HACD4Q5VWC8 232 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 PYHIN1Q6K0P9 492 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 FDX2Q6P4F2 183 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 IL20RBQ6UXL0 311 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 RDH10Q8IZV5 341 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 OR10G3Q8NGC4 313 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 NSMAFQ92636 917 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 DERL3Q96Q80 235 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 MRI1Q9BV20 369 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 SLITRK2Q9H156 845 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 B3GAT2Q9NPZ5 323 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 ALKBH4Q9NXW9 302 aa16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 PTRH2Q9Y3E5 179 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-203ENST00000359895 IGHV1-45A0A0A0MS14 117 aa16.46■□□□□ 0.23
PDLIM7-203ENST00000359895 TMEM212A6NML5 194 aa16.46■□□□□ 0.23
PDLIM7-203ENST00000359895 B4DXG7 233 aa16.46■□□□□ 0.23
PDLIM7-203ENST00000359895 NPIPA5E9PKD4 350 aa16.46■□□□□ 0.23
PDLIM7-203ENST00000359895 ZNF593O00488 134 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms