RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 NOL3O60936 208 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 SEC14L2O76054 403 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 INMTO95050 263 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 APOL3O95236 402 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 BCL10O95999 233 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 PTHP01270 115 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 IGHA1P01876 353 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 LCKP06239 509 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 CLUP10909 449 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 SPI1P17947 270 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 RFC3P40938 356 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 CDKN2AP42771 156 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 POU3F1Q03052 451 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 TLE1Q04724 770 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 PON3Q15166 354 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 FOXB2Q5VYV0 432 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 B3GNT6Q6ZMB0 384 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 ESPNLQ6ZVH7 1005 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 SLC35D2Q76EJ3 337 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 SHFQ7M4L6 423 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 FAM109AQ8N4B1 249 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 POMGNT2Q8NAT1 580 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 ZFP62Q8NB50 900 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 OR51G2Q8NGK0 314 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 OR2T4Q8NH00 348 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 ZPLD1Q8TCW7 415 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 ASB10Q8WXI3 467 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 OXGR1Q96P68 337 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 TEAD3Q99594 435 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 JAM3Q9BX67 310 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 RACGAP1Q9H0H5 632 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 RBM38Q9H0Z9 239 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 RPRD1BQ9NQG5 326 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 TAS2R16Q9NYV7 291 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 MOKQ9UQ07 419 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 RASD1Q9Y272 281 aa12.39□□□□□ -0.43
PDLIM5-203ENST00000359265 MED12Q93074 2177 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 A0A0J9YW62 118 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 EIF1AYO14602 144 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 TNFSF11O14788 317 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 GLCEO94923 617 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 GYPBP06028 91 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 ADRA2AP08913 450 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 IFNGR1P15260 489 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 MAGEA5P43359 124 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 GP2P55259 537 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 GFRA1P56159 465 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 PPIAP62937 165 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 ACTC1P68032 377 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 ACTA1P68133 377 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 C1DQ13901 141 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 GGTLC2Q14390 218 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 MELKQ14680 651 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 TBR1Q16650 682 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 PDSS1Q5T2R2 415 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 HBMQ6B0K9 141 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 TMEM225Q6GV28 225 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 GGNQ86UU5 652 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 CLVS1Q8IUQ0 354 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 GHDCQ8N2G8 530 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 KDM8Q8N371 416 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 PROKR2Q8NFJ6 384 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 OR4F15Q8NGB8 312 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 OR2V1Q8NHB1 315 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 CNN2Q99439 309 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 INPP5EQ9NRR6 644 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 ASB6Q9NWX5 421 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 ITPR2Q14571 2701 aa12.38□□□□□ -0.43
PDLIM5-203ENST00000359265 LOC102725191A0A1B0GVB3 256 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 TMEM129A0AVI4 362 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 PRSS37A4D1T9 235 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 H7C1C5 153 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 TRMUO75648 421 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 VAMP5O95183 116 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 SBK2P0C263 348 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 HLA-DOBP13765 273 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 P2RY4P51582 365 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 LCN6P62502 163 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 MED22Q15528 200 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 TIGD6Q17RP2 521 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 DNM1P34Q6PK57 102 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 ASB18Q6ZVZ8 466 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 UBQLNLQ8IYU4 475 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 ACBD7Q8N6N7 88 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 NANOGP1Q8N7R0 232 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 OR6K6Q8NGW6 343 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 DGCR14Q96DF8 476 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 ZMYND19Q96E35 227 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 ALG12Q9BV10 488 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 SYT4Q9H2B2 425 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 SLC6A15Q9H2J7 730 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 ADGRL4Q9HBW9 690 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 VSX1Q9NZR4 365 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 B3GAT1Q9P2W7 334 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 RSL24D1Q9UHA3 163 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 FKBP7Q9Y680 259 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 CEPT1Q9Y6K0 416 aa12.37□□□□□ -0.43
PDLIM5-203ENST00000359265 C12orf71A8MTZ7 269 aa12.36□□□□□ -0.43
PDLIM5-203ENST00000359265 H3BSA7 217 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms