RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 GSN-AS1Q9NRJ2 163 aa13.11□□□□□ -0.31
APP-205ENST00000358918 YBX2Q9Y2T7 364 aaKnown RBP13.11□□□□□ -0.31
APP-205ENST00000358918 IER3IP1Q9Y5U9 82 aa13.11□□□□□ -0.31
APP-205ENST00000358918 NUDT19A8MXV4 375 aa13.1□□□□□ -0.31
APP-205ENST00000358918 SMAD9O15198 467 aaKnown RBP13.1□□□□□ -0.31
APP-205ENST00000358918 FADS1O60427 444 aa13.1□□□□□ -0.31
APP-205ENST00000358918 CTAG2O75638 210 aa13.1□□□□□ -0.31
APP-205ENST00000358918 PRNPP04156 253 aa13.1□□□□□ -0.31
APP-205ENST00000358918 MAS1P04201 325 aa13.1□□□□□ -0.31
APP-205ENST00000358918 HEXAP06865 529 aa13.1□□□□□ -0.31
APP-205ENST00000358918 MELTFP08582 738 aa13.1□□□□□ -0.31
APP-205ENST00000358918 C6P13671 934 aa13.1□□□□□ -0.31
APP-205ENST00000358918 RPS4Y1P22090 263 aaKnown RBP13.1□□□□□ -0.31
APP-205ENST00000358918 CASRP41180 1078 aa13.1□□□□□ -0.31
APP-205ENST00000358918 PTGFRP43088 359 aa13.1□□□□□ -0.31
APP-205ENST00000358918 VASPP50552 380 aaPredicted RBP13.1□□□□□ -0.31
APP-205ENST00000358918 SRSF4Q08170 494 aaKnown RBP13.1□□□□□ -0.31
APP-205ENST00000358918 VWA2Q5GFL6 755 aa13.1□□□□□ -0.31
APP-205ENST00000358918 SLC6A19Q695T7 634 aa13.1□□□□□ -0.31
APP-205ENST00000358918 FAM220AQ7Z4H9 259 aa13.1□□□□□ -0.31
APP-205ENST00000358918 GABRG1Q8N1C3 465 aa13.1□□□□□ -0.31
APP-205ENST00000358918 OR5AK2Q8NH90 309 aa13.1□□□□□ -0.31
APP-205ENST00000358918 ELP5Q8TE02 316 aa13.1□□□□□ -0.31
APP-205ENST00000358918 PAQR8Q8TEZ7 354 aa13.1□□□□□ -0.31
APP-205ENST00000358918 ZNF559Q9BR84 538 aa13.1□□□□□ -0.31
APP-205ENST00000358918 POTEKPQ9BYX7 375 aa13.1□□□□□ -0.31
APP-205ENST00000358918 TLNRD1Q9H1K6 362 aa13.1□□□□□ -0.31
APP-205ENST00000358918 IGFLR1Q9H665 355 aa13.1□□□□□ -0.31
APP-205ENST00000358918 TRPV4Q9HBA0 871 aa13.1□□□□□ -0.31
APP-205ENST00000358918 NPIPA5A0A0B4J1W7 369 aa13.1□□□□□ -0.31
APP-205ENST00000358918 MEX3AA1L020 520 aaKnown RBP13.1□□□□□ -0.31
APP-205ENST00000358918 OR2W5A6NFC9 320 aa13.1□□□□□ -0.31
APP-205ENST00000358918 NPIPA7E9PJI5 369 aa13.1□□□□□ -0.31
APP-205ENST00000358918 PEX12O00623 359 aa13.1□□□□□ -0.31
APP-205ENST00000358918 FGF16O43320 207 aa13.1□□□□□ -0.31
APP-205ENST00000358918 RPP14O95059 124 aaKnown RBP13.1□□□□□ -0.31
APP-205ENST00000358918 NDUFB2O95178 105 aa13.1□□□□□ -0.31
APP-205ENST00000358918 F12P00748 615 aaPredicted RBP13.1□□□□□ -0.31
APP-205ENST00000358918 SLC35G4P0C7Q5 338 aa13.1□□□□□ -0.31
APP-205ENST00000358918 NPIPA8P0DM63 369 aa13.1□□□□□ -0.31
APP-205ENST00000358918 GRPRP30550 384 aa13.1□□□□□ -0.31
APP-205ENST00000358918 ACTBP60709 375 aa13.1□□□□□ -0.31
APP-205ENST00000358918 ACTG1P63261 375 aa13.1□□□□□ -0.31
APP-205ENST00000358918 ZNF234Q14588 700 aa13.1□□□□□ -0.31
APP-205ENST00000358918 SLC35D3Q5M8T2 416 aa13.1□□□□□ -0.31
APP-205ENST00000358918 NKAIN2Q5VXU1 208 aa13.1□□□□□ -0.31
APP-205ENST00000358918 INO80EQ8NBZ0 244 aaPredicted RBP13.1□□□□□ -0.31
APP-205ENST00000358918 CLEC1AQ8NC01 280 aa13.1□□□□□ -0.31
APP-205ENST00000358918 OR1J2Q8NGS2 313 aa13.1□□□□□ -0.31
APP-205ENST00000358918 SLC25A21Q9BQT8 299 aaPredicted RBP13.1□□□□□ -0.31
APP-205ENST00000358918 A0A1B0GVT2 93 aa13.09□□□□□ -0.31
APP-205ENST00000358918 TMEM200CA6NKL6 621 aa13.09□□□□□ -0.31
APP-205ENST00000358918 OR6C76A6NM76 312 aa13.09□□□□□ -0.31
APP-205ENST00000358918 SSX5O60225 188 aa13.09□□□□□ -0.31
APP-205ENST00000358918 ACTL6AO96019 429 aa13.09□□□□□ -0.31
APP-205ENST00000358918 TACSTD2P09758 323 aa13.09□□□□□ -0.31
APP-205ENST00000358918 SSBP1Q04837 148 aaKnown RBP13.09□□□□□ -0.31
APP-205ENST00000358918 HNRNPA1L2Q32P51 320 aaKnown RBP13.09□□□□□ -0.31
APP-205ENST00000358918 DCST2Q5T1A1 773 aa13.09□□□□□ -0.31
APP-205ENST00000358918 ZNRF4Q8WWF5 429 aa13.09□□□□□ -0.31
APP-205ENST00000358918 OR8D1Q8WZ84 308 aa13.09□□□□□ -0.31
APP-205ENST00000358918 ARSGQ96EG1 525 aa13.09□□□□□ -0.31
APP-205ENST00000358918 SEC11CQ9BY50 192 aa13.09□□□□□ -0.31
APP-205ENST00000358918 XKR8Q9H6D3 395 aa13.09□□□□□ -0.31
APP-205ENST00000358918 MRPS30Q9NP92 439 aaKnown RBP13.09□□□□□ -0.31
APP-205ENST00000358918 FBXL21Q9UKT6 434 aa13.09□□□□□ -0.31
APP-205ENST00000358918 NOP16Q9Y3C1 178 aaKnown RBP13.09□□□□□ -0.31
APP-205ENST00000358918 TCF20Q9UGU0 1960 aaKnown RBP13.09□□□□□ -0.31
APP-205ENST00000358918 C2orf16Q68DN1 1984 aa13.09□□□□□ -0.31
APP-205ENST00000358918 A0A087WV48 116 aa13.09□□□□□ -0.31
APP-205ENST00000358918 EDDM13A0A1B0GTR0 161 aa13.09□□□□□ -0.31
APP-205ENST00000358918 RDH16O75452 317 aa13.09□□□□□ -0.31
APP-205ENST00000358918 RAB3DO95716 219 aa13.09□□□□□ -0.31
APP-205ENST00000358918 ABOP16442 354 aa13.09□□□□□ -0.31
APP-205ENST00000358918 SPI1P17947 270 aa13.09□□□□□ -0.31
APP-205ENST00000358918 HAAOP46952 286 aa13.09□□□□□ -0.31
APP-205ENST00000358918 EFNB2P52799 333 aa13.09□□□□□ -0.31
APP-205ENST00000358918 PNLIPRP2P54317 469 aa13.09□□□□□ -0.31
APP-205ENST00000358918 TAS2R19P59542 299 aa13.09□□□□□ -0.31
APP-205ENST00000358918 SNRPEP62304 92 aaKnown RBP13.09□□□□□ -0.31
APP-205ENST00000358918 DPTQ07507 201 aa13.09□□□□□ -0.31
APP-205ENST00000358918 FHL1Q13642 323 aa13.09□□□□□ -0.31
APP-205ENST00000358918 LIPNQ5VXI9 398 aa13.09□□□□□ -0.31
APP-205ENST00000358918 TANGO2Q6ICL3 276 aa13.09□□□□□ -0.31
APP-205ENST00000358918 ZNF704Q6ZNC4 412 aaPredicted RBP13.09□□□□□ -0.31
APP-205ENST00000358918 SLC22A8Q8TCC7 542 aa13.09□□□□□ -0.31
APP-205ENST00000358918 PPP1R1CQ8WVI7 109 aa13.09□□□□□ -0.31
APP-205ENST00000358918 GPR174Q9BXC1 333 aa13.09□□□□□ -0.31
APP-205ENST00000358918 TINAGQ9UJW2 476 aa13.09□□□□□ -0.31
APP-205ENST00000358918 SULT2B1O00204 365 aa13.08□□□□□ -0.32
APP-205ENST00000358918 WNT11O96014 354 aa13.08□□□□□ -0.32
APP-205ENST00000358918 RPL4P36578 427 aaKnown RBP13.08□□□□□ -0.32
APP-205ENST00000358918 ATP1B3P54709 279 aa13.08□□□□□ -0.32
APP-205ENST00000358918 ALKBH1Q13686 389 aaKnown RBP13.08□□□□□ -0.32
APP-205ENST00000358918 SHHQ15465 462 aa13.08□□□□□ -0.32
APP-205ENST00000358918 INPP5JQ15735 1006 aaPredicted RBP13.08□□□□□ -0.32
APP-205ENST00000358918 PLEKHN1Q494U1 663 aaPredicted RBP13.08□□□□□ -0.32
APP-205ENST00000358918 PRAMEF17Q5VTA0 474 aa13.08□□□□□ -0.32
APP-205ENST00000358918 UNQ6126/PRO20091Q6UXV3 157 aa13.08□□□□□ -0.32
APP-205ENST00000358918 MTSS1LQ765P7 747 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms