RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SLC25A44Q96H78 314 aaPredicted RBP11.23□□□□□ -0.61
COL20A1-201ENST00000358894 NUDT22Q9BRQ3 303 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 C1QTNF6Q9BXI9 259 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 DEFB126Q9BYW3 111 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 FBXL2Q9UKC9 423 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 hCG_1807616A0A1W2PRN6 198 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 HLA-DMAP28067 261 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 PEBP1P30086 187 aaKnown RBP11.22□□□□□ -0.61
COL20A1-201ENST00000358894 LIMS1P48059 325 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 MELKQ14680 651 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 YIF1BQ5BJH7 314 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 UBE2NLQ5JXB2 153 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 ZBTB37Q5TC79 503 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 MARCH3Q86UD3 253 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 NANPQ8TBE9 248 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 NT5CQ8TCD5 201 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 NEK7Q8TDX7 302 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 ZMAT3Q9HA38 289 aaKnown RBP11.22□□□□□ -0.61
COL20A1-201ENST00000358894 LOC105371267A0A1B0GV96 52 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 C4orf51C9J302 202 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 GOSR2O14653 212 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 PHYHO14832 338 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 RAF1P04049 648 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 ATP1B1P05026 303 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 SYPP08247 313 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 MAGEB1P43366 347 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 CAPZA1P52907 286 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 S100A10P60903 97 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 C19orf57Q0VDD7 668 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 CDK5R1Q15078 307 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 MEP1BQ16820 701 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 RNASE10Q5GAN6 216 aaKnown RBP11.22□□□□□ -0.61
COL20A1-201ENST00000358894 MANEAQ5SRI9 462 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 FAAP20Q6NZ36 180 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 COMTD1Q86VU5 262 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 TCTEX1D2Q8WW35 142 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 PMM1Q92871 262 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 SFXN2Q96NB2 322 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 LPAR4Q99677 370 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 SLX1AQ9BQ83 275 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 CAMK2AQ9UQM7 478 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 YBX2Q9Y2T7 364 aaKnown RBP11.22□□□□□ -0.61
COL20A1-201ENST00000358894 AHCTF1Q8WYP5 2266 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 EEF1E1-BLOC1S5C9J1V9 151 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF878C9JN71 531 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 ERVH48-1M5A8F1 160 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 GLCEO94923 617 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 RAB3DO95716 219 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 EXOSC2Q13868 293 aaKnown RBP11.22□□□□□ -0.61
COL20A1-201ENST00000358894 FAM69AQ5T7M9 428 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 YOD1Q5VVQ6 348 aaPredicted RBP11.22□□□□□ -0.61
COL20A1-201ENST00000358894 Q6ZS52 159 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 ZAR1Q86SH2 424 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 TSLPQ969D9 159 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 LCORQ96JN0 433 aaPredicted RBP11.22□□□□□ -0.61
COL20A1-201ENST00000358894 SEC22CQ9BRL7 303 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 AUNIPQ9H7T9 357 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 TAS2R8Q9NYW2 309 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 HS3ST3A1Q9Y663 406 aa11.22□□□□□ -0.61
COL20A1-201ENST00000358894 MN1Q10571 1320 aaPredicted RBP11.22□□□□□ -0.61
COL20A1-201ENST00000358894 RBM34P42696 430 aaKnown RBP11.21□□□□□ -0.61
COL20A1-201ENST00000358894 POU3F1Q03052 451 aaPredicted RBP11.21□□□□□ -0.61
COL20A1-201ENST00000358894 TFF2Q03403 129 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 RASGEF1BQ0VAM2 473 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 FUT5Q11128 374 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 CCINQ13939 588 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 SSX2Q16385 188 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF628Q5EBL2 1059 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 GPR139Q6DWJ6 353 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 TMEM88Q6PEY1 159 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 SSX9Q7RTT3 188 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 WDSUB1Q8N9V3 476 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 OR6M1Q8NGM8 313 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 OR52I2Q8NH67 350 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 SLC2A12Q8TD20 617 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 SMIM19Q96E16 107 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF681Q96N22 645 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 FAM60AQ9NP50 221 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 MMP17Q9ULZ9 603 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 SLC6A5Q9Y345 797 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 IGHV3-20A0A0C4DH32 117 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 DIO1P49895 249 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 CORO6Q6QEF8 472 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 TMEM205Q6UW68 189 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 PNLDC1Q8NA58 520 aaKnown RBP11.21□□□□□ -0.61
COL20A1-201ENST00000358894 SSX3Q99909 188 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 PTGES2Q9H7Z7 377 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 C2orf42Q9NWW7 574 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 ACAD8Q9UKU7 415 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 TRIOBPQ9H2D6 2365 aa11.21□□□□□ -0.61
COL20A1-201ENST00000358894 NAP1L6A6NFF2 107 aa11.21□□□□□ -0.62
COL20A1-201ENST00000358894 OR2T1O43869 369 aa11.21□□□□□ -0.62
COL20A1-201ENST00000358894 ACTBP60709 375 aa11.21□□□□□ -0.62
COL20A1-201ENST00000358894 ACTG1P63261 375 aa11.21□□□□□ -0.62
COL20A1-201ENST00000358894 ALKBH1Q13686 389 aaKnown RBP11.21□□□□□ -0.62
COL20A1-201ENST00000358894 VWA2Q5GFL6 755 aa11.21□□□□□ -0.62
COL20A1-201ENST00000358894 NDUFAF7Q7L592 441 aa11.21□□□□□ -0.62
COL20A1-201ENST00000358894 NXF5Q9H1B4 397 aaKnown RBP11.21□□□□□ -0.62
COL20A1-201ENST00000358894 FLVCR2Q9UPI3 526 aa11.21□□□□□ -0.62
COL20A1-201ENST00000358894 A0A0A6YYJ9 748 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms